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Mix-and-extrude: high-viscosity sample injection towards time-resolved protein crystallography
Time-resolved crystallography enables the visualization of protein molecular motion during a reaction. Although light is often used to initiate reactions in time-resolved crystallography, only a small number of proteins can be activated by light. However, many biological reactions can be triggered b...
Autores principales: | , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10405586/ https://www.ncbi.nlm.nih.gov/pubmed/37555221 http://dx.doi.org/10.1107/S1600576723004405 |
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author | Vakili, Mohammad Han, Huijong Schmidt, Christina Wrona, Agnieszka Kloos, Marco de Diego, Iñaki Dörner, Katerina Geng, Tian Kim, Chan Koua, Faisal H. M. Melo, Diogo V. M. Rappas, Mathieu Round, Adam Round, Ekaterina Sikorski, Marcin Valerio, Joana Zhou, Tiankun Lorenzen, Kristina Schulz, Joachim |
author_facet | Vakili, Mohammad Han, Huijong Schmidt, Christina Wrona, Agnieszka Kloos, Marco de Diego, Iñaki Dörner, Katerina Geng, Tian Kim, Chan Koua, Faisal H. M. Melo, Diogo V. M. Rappas, Mathieu Round, Adam Round, Ekaterina Sikorski, Marcin Valerio, Joana Zhou, Tiankun Lorenzen, Kristina Schulz, Joachim |
author_sort | Vakili, Mohammad |
collection | PubMed |
description | Time-resolved crystallography enables the visualization of protein molecular motion during a reaction. Although light is often used to initiate reactions in time-resolved crystallography, only a small number of proteins can be activated by light. However, many biological reactions can be triggered by the interaction between proteins and ligands. The sample delivery method presented here uses a mix-and-extrude approach based on 3D-printed microchannels in conjunction with a micronozzle. The diffusive mixing enables the study of the dynamics of samples in viscous media. The device design allows mixing of the ligands and protein crystals in 2 to 20 s. The device characterization using a model system (fluorescence quenching of iq-mEmerald proteins by copper ions) demonstrated that ligand and protein crystals, each within lipidic cubic phase, can be mixed efficiently. The potential of this approach for time-resolved membrane protein crystallography to support the development of new drugs is discussed. |
format | Online Article Text |
id | pubmed-10405586 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-104055862023-08-08 Mix-and-extrude: high-viscosity sample injection towards time-resolved protein crystallography Vakili, Mohammad Han, Huijong Schmidt, Christina Wrona, Agnieszka Kloos, Marco de Diego, Iñaki Dörner, Katerina Geng, Tian Kim, Chan Koua, Faisal H. M. Melo, Diogo V. M. Rappas, Mathieu Round, Adam Round, Ekaterina Sikorski, Marcin Valerio, Joana Zhou, Tiankun Lorenzen, Kristina Schulz, Joachim J Appl Crystallogr Research Papers Time-resolved crystallography enables the visualization of protein molecular motion during a reaction. Although light is often used to initiate reactions in time-resolved crystallography, only a small number of proteins can be activated by light. However, many biological reactions can be triggered by the interaction between proteins and ligands. The sample delivery method presented here uses a mix-and-extrude approach based on 3D-printed microchannels in conjunction with a micronozzle. The diffusive mixing enables the study of the dynamics of samples in viscous media. The device design allows mixing of the ligands and protein crystals in 2 to 20 s. The device characterization using a model system (fluorescence quenching of iq-mEmerald proteins by copper ions) demonstrated that ligand and protein crystals, each within lipidic cubic phase, can be mixed efficiently. The potential of this approach for time-resolved membrane protein crystallography to support the development of new drugs is discussed. International Union of Crystallography 2023-06-12 /pmc/articles/PMC10405586/ /pubmed/37555221 http://dx.doi.org/10.1107/S1600576723004405 Text en © Mohammad Vakili et al. 2023 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Research Papers Vakili, Mohammad Han, Huijong Schmidt, Christina Wrona, Agnieszka Kloos, Marco de Diego, Iñaki Dörner, Katerina Geng, Tian Kim, Chan Koua, Faisal H. M. Melo, Diogo V. M. Rappas, Mathieu Round, Adam Round, Ekaterina Sikorski, Marcin Valerio, Joana Zhou, Tiankun Lorenzen, Kristina Schulz, Joachim Mix-and-extrude: high-viscosity sample injection towards time-resolved protein crystallography |
title | Mix-and-extrude: high-viscosity sample injection towards time-resolved protein crystallography |
title_full | Mix-and-extrude: high-viscosity sample injection towards time-resolved protein crystallography |
title_fullStr | Mix-and-extrude: high-viscosity sample injection towards time-resolved protein crystallography |
title_full_unstemmed | Mix-and-extrude: high-viscosity sample injection towards time-resolved protein crystallography |
title_short | Mix-and-extrude: high-viscosity sample injection towards time-resolved protein crystallography |
title_sort | mix-and-extrude: high-viscosity sample injection towards time-resolved protein crystallography |
topic | Research Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10405586/ https://www.ncbi.nlm.nih.gov/pubmed/37555221 http://dx.doi.org/10.1107/S1600576723004405 |
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