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TEMGYM Basic: transmission electron microscopy simulation software for teaching and training of microscope operation

An interactive simulation of a transmission electron microscope (TEM) called TEMGYM Basic is developed here, which enables users to understand how to operate and control an electron beam without the need to access an instrument. TEMGYM Basic allows users to familiarize themselves with alignment proc...

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Detalles Bibliográficos
Autores principales: Landers, David, Clancy, Ian, Weber, Dieter, Dunin-Borkowski, Rafal E., Stewart, Andrew
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10405588/
https://www.ncbi.nlm.nih.gov/pubmed/37555218
http://dx.doi.org/10.1107/S1600576723005174
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author Landers, David
Clancy, Ian
Weber, Dieter
Dunin-Borkowski, Rafal E.
Stewart, Andrew
author_facet Landers, David
Clancy, Ian
Weber, Dieter
Dunin-Borkowski, Rafal E.
Stewart, Andrew
author_sort Landers, David
collection PubMed
description An interactive simulation of a transmission electron microscope (TEM) called TEMGYM Basic is developed here, which enables users to understand how to operate and control an electron beam without the need to access an instrument. TEMGYM Basic allows users to familiarize themselves with alignment procedures offline, reducing the time and money required to become a proficient TEM operator. In addition to teaching the basics of electron beam alignments, the software enables users to create bespoke microscope configurations and develop an understanding of how to operate the configurations without sitting at a microscope. TEMGYM Basic also creates static ray diagram figures for a given lens configuration. The available components include apertures, lenses, quadrupoles, deflectors and biprisms. The software design uses first-order ray transfer matrices to calculate ray paths through each electron microscope component, and the program is developed entirely in Python to facilitate compatibility with machine-learning packages for future exploration of automated control.
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spelling pubmed-104055882023-08-08 TEMGYM Basic: transmission electron microscopy simulation software for teaching and training of microscope operation Landers, David Clancy, Ian Weber, Dieter Dunin-Borkowski, Rafal E. Stewart, Andrew J Appl Crystallogr Computer Programs An interactive simulation of a transmission electron microscope (TEM) called TEMGYM Basic is developed here, which enables users to understand how to operate and control an electron beam without the need to access an instrument. TEMGYM Basic allows users to familiarize themselves with alignment procedures offline, reducing the time and money required to become a proficient TEM operator. In addition to teaching the basics of electron beam alignments, the software enables users to create bespoke microscope configurations and develop an understanding of how to operate the configurations without sitting at a microscope. TEMGYM Basic also creates static ray diagram figures for a given lens configuration. The available components include apertures, lenses, quadrupoles, deflectors and biprisms. The software design uses first-order ray transfer matrices to calculate ray paths through each electron microscope component, and the program is developed entirely in Python to facilitate compatibility with machine-learning packages for future exploration of automated control. International Union of Crystallography 2023-07-14 /pmc/articles/PMC10405588/ /pubmed/37555218 http://dx.doi.org/10.1107/S1600576723005174 Text en © David Landers et al. 2023 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Computer Programs
Landers, David
Clancy, Ian
Weber, Dieter
Dunin-Borkowski, Rafal E.
Stewart, Andrew
TEMGYM Basic: transmission electron microscopy simulation software for teaching and training of microscope operation
title TEMGYM Basic: transmission electron microscopy simulation software for teaching and training of microscope operation
title_full TEMGYM Basic: transmission electron microscopy simulation software for teaching and training of microscope operation
title_fullStr TEMGYM Basic: transmission electron microscopy simulation software for teaching and training of microscope operation
title_full_unstemmed TEMGYM Basic: transmission electron microscopy simulation software for teaching and training of microscope operation
title_short TEMGYM Basic: transmission electron microscopy simulation software for teaching and training of microscope operation
title_sort temgym basic: transmission electron microscopy simulation software for teaching and training of microscope operation
topic Computer Programs
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10405588/
https://www.ncbi.nlm.nih.gov/pubmed/37555218
http://dx.doi.org/10.1107/S1600576723005174
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