Cargando…
A complete mitogenome of the Przewalski’s Wonder Gecko (Teratoscincus przewalskii) from the Junggar Basin in Northwest China with its phylogenetic implications
A complete mitogenome of the Przewalski’s Wonder Gecko (Teratoscincus przewalskii) from the Junggar Basin in Northwest China was determined by using polymerase chain reaction and directly sequenced with the primer walking method. The total length was 17,184 bp, containing 13 protein-coding genes (PC...
Autores principales: | , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10405747/ https://www.ncbi.nlm.nih.gov/pubmed/37554553 http://dx.doi.org/10.1080/23802359.2023.2186722 |
_version_ | 1785085602342895616 |
---|---|
author | Li, Jun Guo, Xianguang |
author_facet | Li, Jun Guo, Xianguang |
author_sort | Li, Jun |
collection | PubMed |
description | A complete mitogenome of the Przewalski’s Wonder Gecko (Teratoscincus przewalskii) from the Junggar Basin in Northwest China was determined by using polymerase chain reaction and directly sequenced with the primer walking method. The total length was 17,184 bp, containing 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), two ribosomal RNA genes (rRNAs) and a control region (CR). The order and structure of the genes were identical to those of congeners. The 13 PCGs contain four start codons (ATG, GTG, ATA, and ATC), three complete stop codons (TAA, TAG, and AGG), and two incomplete stop codons (T–, TA-). The concatenated PCGs were used to perform Bayesian phylogenetic analyses together with mitogenome data of the family Sphaerodactylidae and related representative taxa available in GenBank. The resulting tree recovered the monophyly of Sphaerodactylidae, and confirmed the sister relationship between T. przewalskii and T. roborowskii with strong support. The newly determined mitogenome will provide fundamental data for understanding the population genetic structure of T. pzrewalskii in particular, and the mitochondrial DNA evolution in Sphaerodactylidae in general. |
format | Online Article Text |
id | pubmed-10405747 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-104057472023-08-08 A complete mitogenome of the Przewalski’s Wonder Gecko (Teratoscincus przewalskii) from the Junggar Basin in Northwest China with its phylogenetic implications Li, Jun Guo, Xianguang Mitochondrial DNA B Resour Mitogenome Announcement A complete mitogenome of the Przewalski’s Wonder Gecko (Teratoscincus przewalskii) from the Junggar Basin in Northwest China was determined by using polymerase chain reaction and directly sequenced with the primer walking method. The total length was 17,184 bp, containing 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), two ribosomal RNA genes (rRNAs) and a control region (CR). The order and structure of the genes were identical to those of congeners. The 13 PCGs contain four start codons (ATG, GTG, ATA, and ATC), three complete stop codons (TAA, TAG, and AGG), and two incomplete stop codons (T–, TA-). The concatenated PCGs were used to perform Bayesian phylogenetic analyses together with mitogenome data of the family Sphaerodactylidae and related representative taxa available in GenBank. The resulting tree recovered the monophyly of Sphaerodactylidae, and confirmed the sister relationship between T. przewalskii and T. roborowskii with strong support. The newly determined mitogenome will provide fundamental data for understanding the population genetic structure of T. pzrewalskii in particular, and the mitochondrial DNA evolution in Sphaerodactylidae in general. Taylor & Francis 2023-03-13 /pmc/articles/PMC10405747/ /pubmed/37554553 http://dx.doi.org/10.1080/23802359.2023.2186722 Text en © 2023 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. The terms on which this article has been published allow the posting of the Accepted Manuscript in a repository by the author(s) or with their consent. |
spellingShingle | Mitogenome Announcement Li, Jun Guo, Xianguang A complete mitogenome of the Przewalski’s Wonder Gecko (Teratoscincus przewalskii) from the Junggar Basin in Northwest China with its phylogenetic implications |
title | A complete mitogenome of the Przewalski’s Wonder Gecko (Teratoscincus przewalskii) from the Junggar Basin in Northwest China with its phylogenetic implications |
title_full | A complete mitogenome of the Przewalski’s Wonder Gecko (Teratoscincus przewalskii) from the Junggar Basin in Northwest China with its phylogenetic implications |
title_fullStr | A complete mitogenome of the Przewalski’s Wonder Gecko (Teratoscincus przewalskii) from the Junggar Basin in Northwest China with its phylogenetic implications |
title_full_unstemmed | A complete mitogenome of the Przewalski’s Wonder Gecko (Teratoscincus przewalskii) from the Junggar Basin in Northwest China with its phylogenetic implications |
title_short | A complete mitogenome of the Przewalski’s Wonder Gecko (Teratoscincus przewalskii) from the Junggar Basin in Northwest China with its phylogenetic implications |
title_sort | complete mitogenome of the przewalski’s wonder gecko (teratoscincus przewalskii) from the junggar basin in northwest china with its phylogenetic implications |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10405747/ https://www.ncbi.nlm.nih.gov/pubmed/37554553 http://dx.doi.org/10.1080/23802359.2023.2186722 |
work_keys_str_mv | AT lijun acompletemitogenomeoftheprzewalskiswondergeckoteratoscincusprzewalskiifromthejunggarbasininnorthwestchinawithitsphylogeneticimplications AT guoxianguang acompletemitogenomeoftheprzewalskiswondergeckoteratoscincusprzewalskiifromthejunggarbasininnorthwestchinawithitsphylogeneticimplications AT lijun completemitogenomeoftheprzewalskiswondergeckoteratoscincusprzewalskiifromthejunggarbasininnorthwestchinawithitsphylogeneticimplications AT guoxianguang completemitogenomeoftheprzewalskiswondergeckoteratoscincusprzewalskiifromthejunggarbasininnorthwestchinawithitsphylogeneticimplications |