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Influence of contrast and texture based image modifications on the performance and attention shift of U-Net models for brain tissue segmentation
Contrast and texture modifications applied during training or test-time have recently shown promising results to enhance the generalization performance of deep learning segmentation methods in medical image analysis. However, a deeper understanding of this phenomenon has not been investigated. In th...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10406260/ https://www.ncbi.nlm.nih.gov/pubmed/37555149 http://dx.doi.org/10.3389/fnimg.2022.1012639 |
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author | You, Suhang Reyes, Mauricio |
author_facet | You, Suhang Reyes, Mauricio |
author_sort | You, Suhang |
collection | PubMed |
description | Contrast and texture modifications applied during training or test-time have recently shown promising results to enhance the generalization performance of deep learning segmentation methods in medical image analysis. However, a deeper understanding of this phenomenon has not been investigated. In this study, we investigated this phenomenon using a controlled experimental setting, using datasets from the Human Connectome Project and a large set of simulated MR protocols, in order to mitigate data confounders and investigate possible explanations as to why model performance changes when applying different levels of contrast and texture-based modifications. Our experiments confirm previous findings regarding the improved performance of models subjected to contrast and texture modifications employed during training and/or testing time, but further show the interplay when these operations are combined, as well as the regimes of model improvement/worsening across scanning parameters. Furthermore, our findings demonstrate a spatial attention shift phenomenon of trained models, occurring for different levels of model performance, and varying in relation to the type of applied image modification. |
format | Online Article Text |
id | pubmed-10406260 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-104062602023-08-08 Influence of contrast and texture based image modifications on the performance and attention shift of U-Net models for brain tissue segmentation You, Suhang Reyes, Mauricio Front Neuroimaging Neuroimaging Contrast and texture modifications applied during training or test-time have recently shown promising results to enhance the generalization performance of deep learning segmentation methods in medical image analysis. However, a deeper understanding of this phenomenon has not been investigated. In this study, we investigated this phenomenon using a controlled experimental setting, using datasets from the Human Connectome Project and a large set of simulated MR protocols, in order to mitigate data confounders and investigate possible explanations as to why model performance changes when applying different levels of contrast and texture-based modifications. Our experiments confirm previous findings regarding the improved performance of models subjected to contrast and texture modifications employed during training and/or testing time, but further show the interplay when these operations are combined, as well as the regimes of model improvement/worsening across scanning parameters. Furthermore, our findings demonstrate a spatial attention shift phenomenon of trained models, occurring for different levels of model performance, and varying in relation to the type of applied image modification. Frontiers Media S.A. 2022-10-28 /pmc/articles/PMC10406260/ /pubmed/37555149 http://dx.doi.org/10.3389/fnimg.2022.1012639 Text en Copyright © 2022 You and Reyes. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroimaging You, Suhang Reyes, Mauricio Influence of contrast and texture based image modifications on the performance and attention shift of U-Net models for brain tissue segmentation |
title | Influence of contrast and texture based image modifications on the performance and attention shift of U-Net models for brain tissue segmentation |
title_full | Influence of contrast and texture based image modifications on the performance and attention shift of U-Net models for brain tissue segmentation |
title_fullStr | Influence of contrast and texture based image modifications on the performance and attention shift of U-Net models for brain tissue segmentation |
title_full_unstemmed | Influence of contrast and texture based image modifications on the performance and attention shift of U-Net models for brain tissue segmentation |
title_short | Influence of contrast and texture based image modifications on the performance and attention shift of U-Net models for brain tissue segmentation |
title_sort | influence of contrast and texture based image modifications on the performance and attention shift of u-net models for brain tissue segmentation |
topic | Neuroimaging |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10406260/ https://www.ncbi.nlm.nih.gov/pubmed/37555149 http://dx.doi.org/10.3389/fnimg.2022.1012639 |
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