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MedalCare-XL: 16,900 healthy and pathological synthetic 12 lead ECGs from electrophysiological simulations
Mechanistic cardiac electrophysiology models allow for personalized simulations of the electrical activity in the heart and the ensuing electrocardiogram (ECG) on the body surface. As such, synthetic signals possess known ground truth labels of the underlying disease and can be employed for validati...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10409805/ https://www.ncbi.nlm.nih.gov/pubmed/37553349 http://dx.doi.org/10.1038/s41597-023-02416-4 |
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author | Gillette, Karli Gsell, Matthias A. F. Nagel, Claudia Bender, Jule Winkler, Benjamin Williams, Steven E. Bär, Markus Schäffter, Tobias Dössel, Olaf Plank, Gernot Loewe, Axel |
author_facet | Gillette, Karli Gsell, Matthias A. F. Nagel, Claudia Bender, Jule Winkler, Benjamin Williams, Steven E. Bär, Markus Schäffter, Tobias Dössel, Olaf Plank, Gernot Loewe, Axel |
author_sort | Gillette, Karli |
collection | PubMed |
description | Mechanistic cardiac electrophysiology models allow for personalized simulations of the electrical activity in the heart and the ensuing electrocardiogram (ECG) on the body surface. As such, synthetic signals possess known ground truth labels of the underlying disease and can be employed for validation of machine learning ECG analysis tools in addition to clinical signals. Recently, synthetic ECGs were used to enrich sparse clinical data or even replace them completely during training leading to improved performance on real-world clinical test data. We thus generated a novel synthetic database comprising a total of 16,900 12 lead ECGs based on electrophysiological simulations equally distributed into healthy control and 7 pathology classes. The pathological case of myocardial infraction had 6 sub-classes. A comparison of extracted features between the virtual cohort and a publicly available clinical ECG database demonstrated that the synthetic signals represent clinical ECGs for healthy and pathological subpopulations with high fidelity. The ECG database is split into training, validation, and test folds for development and objective assessment of novel machine learning algorithms. |
format | Online Article Text |
id | pubmed-10409805 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-104098052023-08-10 MedalCare-XL: 16,900 healthy and pathological synthetic 12 lead ECGs from electrophysiological simulations Gillette, Karli Gsell, Matthias A. F. Nagel, Claudia Bender, Jule Winkler, Benjamin Williams, Steven E. Bär, Markus Schäffter, Tobias Dössel, Olaf Plank, Gernot Loewe, Axel Sci Data Data Descriptor Mechanistic cardiac electrophysiology models allow for personalized simulations of the electrical activity in the heart and the ensuing electrocardiogram (ECG) on the body surface. As such, synthetic signals possess known ground truth labels of the underlying disease and can be employed for validation of machine learning ECG analysis tools in addition to clinical signals. Recently, synthetic ECGs were used to enrich sparse clinical data or even replace them completely during training leading to improved performance on real-world clinical test data. We thus generated a novel synthetic database comprising a total of 16,900 12 lead ECGs based on electrophysiological simulations equally distributed into healthy control and 7 pathology classes. The pathological case of myocardial infraction had 6 sub-classes. A comparison of extracted features between the virtual cohort and a publicly available clinical ECG database demonstrated that the synthetic signals represent clinical ECGs for healthy and pathological subpopulations with high fidelity. The ECG database is split into training, validation, and test folds for development and objective assessment of novel machine learning algorithms. Nature Publishing Group UK 2023-08-08 /pmc/articles/PMC10409805/ /pubmed/37553349 http://dx.doi.org/10.1038/s41597-023-02416-4 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Data Descriptor Gillette, Karli Gsell, Matthias A. F. Nagel, Claudia Bender, Jule Winkler, Benjamin Williams, Steven E. Bär, Markus Schäffter, Tobias Dössel, Olaf Plank, Gernot Loewe, Axel MedalCare-XL: 16,900 healthy and pathological synthetic 12 lead ECGs from electrophysiological simulations |
title | MedalCare-XL: 16,900 healthy and pathological synthetic 12 lead ECGs from electrophysiological simulations |
title_full | MedalCare-XL: 16,900 healthy and pathological synthetic 12 lead ECGs from electrophysiological simulations |
title_fullStr | MedalCare-XL: 16,900 healthy and pathological synthetic 12 lead ECGs from electrophysiological simulations |
title_full_unstemmed | MedalCare-XL: 16,900 healthy and pathological synthetic 12 lead ECGs from electrophysiological simulations |
title_short | MedalCare-XL: 16,900 healthy and pathological synthetic 12 lead ECGs from electrophysiological simulations |
title_sort | medalcare-xl: 16,900 healthy and pathological synthetic 12 lead ecgs from electrophysiological simulations |
topic | Data Descriptor |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10409805/ https://www.ncbi.nlm.nih.gov/pubmed/37553349 http://dx.doi.org/10.1038/s41597-023-02416-4 |
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