Cargando…

Parameter estimation from aggregate observations: a Wasserstein distance-based sequential Monte Carlo sampler

In this work, we study systems consisting of a group of moving particles. In such systems, often some important parameters are unknown and have to be estimated from observed data. Such parameter estimation problems can often be solved via a Bayesian inference framework. However, in many practical pr...

Descripción completa

Detalles Bibliográficos
Autores principales: Cheng, Chen, Wen, Linjie, Li, Jinglai
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10410207/
https://www.ncbi.nlm.nih.gov/pubmed/37564064
http://dx.doi.org/10.1098/rsos.230275
_version_ 1785086405662212096
author Cheng, Chen
Wen, Linjie
Li, Jinglai
author_facet Cheng, Chen
Wen, Linjie
Li, Jinglai
author_sort Cheng, Chen
collection PubMed
description In this work, we study systems consisting of a group of moving particles. In such systems, often some important parameters are unknown and have to be estimated from observed data. Such parameter estimation problems can often be solved via a Bayesian inference framework. However, in many practical problems, only data at the aggregate level is available and as a result the likelihood function is not available, which poses a challenge for Bayesian methods. In particular, we consider the situation where the distributions of the particles are observed. We propose a Wasserstein distance (WD)-based sequential Monte Carlo sampler to solve the problem: the WD is used to measure the similarity between the observed and the simulated particle distributions and the sequential Monte Carlo samplers is used to deal with the sequentially available observations. Two real-world examples are provided to demonstrate the performance of the proposed method.
format Online
Article
Text
id pubmed-10410207
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher The Royal Society
record_format MEDLINE/PubMed
spelling pubmed-104102072023-08-10 Parameter estimation from aggregate observations: a Wasserstein distance-based sequential Monte Carlo sampler Cheng, Chen Wen, Linjie Li, Jinglai R Soc Open Sci Mathematics In this work, we study systems consisting of a group of moving particles. In such systems, often some important parameters are unknown and have to be estimated from observed data. Such parameter estimation problems can often be solved via a Bayesian inference framework. However, in many practical problems, only data at the aggregate level is available and as a result the likelihood function is not available, which poses a challenge for Bayesian methods. In particular, we consider the situation where the distributions of the particles are observed. We propose a Wasserstein distance (WD)-based sequential Monte Carlo sampler to solve the problem: the WD is used to measure the similarity between the observed and the simulated particle distributions and the sequential Monte Carlo samplers is used to deal with the sequentially available observations. Two real-world examples are provided to demonstrate the performance of the proposed method. The Royal Society 2023-08-09 /pmc/articles/PMC10410207/ /pubmed/37564064 http://dx.doi.org/10.1098/rsos.230275 Text en © 2023 The Authors. https://creativecommons.org/licenses/by/4.0/Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, provided the original author and source are credited.
spellingShingle Mathematics
Cheng, Chen
Wen, Linjie
Li, Jinglai
Parameter estimation from aggregate observations: a Wasserstein distance-based sequential Monte Carlo sampler
title Parameter estimation from aggregate observations: a Wasserstein distance-based sequential Monte Carlo sampler
title_full Parameter estimation from aggregate observations: a Wasserstein distance-based sequential Monte Carlo sampler
title_fullStr Parameter estimation from aggregate observations: a Wasserstein distance-based sequential Monte Carlo sampler
title_full_unstemmed Parameter estimation from aggregate observations: a Wasserstein distance-based sequential Monte Carlo sampler
title_short Parameter estimation from aggregate observations: a Wasserstein distance-based sequential Monte Carlo sampler
title_sort parameter estimation from aggregate observations: a wasserstein distance-based sequential monte carlo sampler
topic Mathematics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10410207/
https://www.ncbi.nlm.nih.gov/pubmed/37564064
http://dx.doi.org/10.1098/rsos.230275
work_keys_str_mv AT chengchen parameterestimationfromaggregateobservationsawassersteindistancebasedsequentialmontecarlosampler
AT wenlinjie parameterestimationfromaggregateobservationsawassersteindistancebasedsequentialmontecarlosampler
AT lijinglai parameterestimationfromaggregateobservationsawassersteindistancebasedsequentialmontecarlosampler