TRGdb: a universal resource for the exploration of taxonomically restricted genes in bacteria

The TRGdb database is a resource dedicated to taxonomically restricted genes (TRGs) in bacteria. It provides a comprehensive collection of genes that are specific to different genera and species, according to the latest release of bacterial taxonomy. The user interface allows for easy browsing and s...

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Detalles Bibliográficos
Autores principales: Zielezinski, Andrzej, Dobrychlop, Wojciech, Karlowski, Wojciech M
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Original Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10410690/
https://www.ncbi.nlm.nih.gov/pubmed/37555549
http://dx.doi.org/10.1093/database/baad058
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author Zielezinski, Andrzej
Dobrychlop, Wojciech
Karlowski, Wojciech M
author_facet Zielezinski, Andrzej
Dobrychlop, Wojciech
Karlowski, Wojciech M
author_sort Zielezinski, Andrzej
collection PubMed
description The TRGdb database is a resource dedicated to taxonomically restricted genes (TRGs) in bacteria. It provides a comprehensive collection of genes that are specific to different genera and species, according to the latest release of bacterial taxonomy. The user interface allows for easy browsing and searching as well as sequence similarity exploration. The website also provides information on each TRG protein sequence, including its level of disorder, complexity and tendency to aggregate. TRGdb is a valuable resource for gaining a deeper understanding of the TRG-associated, unique features, and characteristics of bacterial organisms. Database URL www.combio.pl/trgdb
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spelling pubmed-104106902023-08-10 TRGdb: a universal resource for the exploration of taxonomically restricted genes in bacteria Zielezinski, Andrzej Dobrychlop, Wojciech Karlowski, Wojciech M Database (Oxford) Original Article The TRGdb database is a resource dedicated to taxonomically restricted genes (TRGs) in bacteria. It provides a comprehensive collection of genes that are specific to different genera and species, according to the latest release of bacterial taxonomy. The user interface allows for easy browsing and searching as well as sequence similarity exploration. The website also provides information on each TRG protein sequence, including its level of disorder, complexity and tendency to aggregate. TRGdb is a valuable resource for gaining a deeper understanding of the TRG-associated, unique features, and characteristics of bacterial organisms. Database URL www.combio.pl/trgdb Oxford University Press 2023-08-08 /pmc/articles/PMC10410690/ /pubmed/37555549 http://dx.doi.org/10.1093/database/baad058 Text en © The Author(s) 2023. Published by Oxford University Press. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Zielezinski, Andrzej
Dobrychlop, Wojciech
Karlowski, Wojciech M
TRGdb: a universal resource for the exploration of taxonomically restricted genes in bacteria
title TRGdb: a universal resource for the exploration of taxonomically restricted genes in bacteria
title_full TRGdb: a universal resource for the exploration of taxonomically restricted genes in bacteria
title_fullStr TRGdb: a universal resource for the exploration of taxonomically restricted genes in bacteria
title_full_unstemmed TRGdb: a universal resource for the exploration of taxonomically restricted genes in bacteria
title_short TRGdb: a universal resource for the exploration of taxonomically restricted genes in bacteria
title_sort trgdb: a universal resource for the exploration of taxonomically restricted genes in bacteria
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10410690/
https://www.ncbi.nlm.nih.gov/pubmed/37555549
http://dx.doi.org/10.1093/database/baad058
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