Cargando…
Association of LINC-PINT polymorphisms with lumbar disc herniation risk among Chinese Han population: a case control study
BACKGROUND: Lumbar disc herniation (LDH) is a complex spinal disease, with multiple genetic polymorphisms being related to its risk. Nevertheless, the role of LINC-PINT polymorphisms in LDH risk has remained unknown. Therefore, this study aimed to investigate the association between LINC-PINT polymo...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10410956/ https://www.ncbi.nlm.nih.gov/pubmed/37553573 http://dx.doi.org/10.1186/s13018-023-04052-5 |
_version_ | 1785086567481606144 |
---|---|
author | Wu, Yimin Bai, Ming Yu, Yingnan Wang, Yupeng Zhang, Yuan |
author_facet | Wu, Yimin Bai, Ming Yu, Yingnan Wang, Yupeng Zhang, Yuan |
author_sort | Wu, Yimin |
collection | PubMed |
description | BACKGROUND: Lumbar disc herniation (LDH) is a complex spinal disease, with multiple genetic polymorphisms being related to its risk. Nevertheless, the role of LINC-PINT polymorphisms in LDH risk has remained unknown. Therefore, this study aimed to investigate the association between LINC-PINT polymorphisms and LDH risk. METHODS: DNA was extracted from 504 LDH patients and 500 healthy controls. Three single nucleotide polymorphisms (SNPs) in LINC-PINT were selected and genotyped using Agena MassARRAY. We used logistic regression analysis to calculate odds ratios (ORs) and 95% confidence intervals (95% CIs) under multiple genetic models to evaluate the association between LINC-PINT polymorphisms and LDH risk. Haploview 4.2 and SNPStats software were used to evaluate the linkage strength of SNPs and the correlation between haplotypes and LDH risk. The impact of SNP-SNP interactions on LDH risk was analyzed using multi-factor dimensionality reduction (MDR). RESULTS: Results showed that rs157916 (G vs. A: OR = 1.23, FDR-p = 0.029) and rs7801029 (G vs. C: OR = 1.39, FDR-p = 0.006; GG vs. CC: OR = 2.34, FDR-p = 0.038; recessive: OR = 2.13, FDR-p = 0.045; additive: OR = 1.39, FDR-p = 0.030) were associated with an increased risk of LDH. Furthermore, LINC-PINT rs157916 and rs780129 were found to be significantly associated with LDH risk in males. The “GGG” haplotype was associated with increased LDH risk (OR = 1.41, FDR-p = 0.006). MDR analysis indicated that the interaction between rs7801029 and rs16873842 was associated with an increased risk of LDH (OR = 1.47, p = 0.004). Additionally, there were significant differences in C-reactive protein levels among different genotypes of rs157916 and rs780129 (p < 0.05). CONCLUSION: This study suggests that LINC-PINT gene polymorphisms (rs157916 and rs7801029) are considered risk factors for LDH in the Chinese Han population and provide a scientific basis for early screening, prevention, and diagnosis of LDH. |
format | Online Article Text |
id | pubmed-10410956 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-104109562023-08-10 Association of LINC-PINT polymorphisms with lumbar disc herniation risk among Chinese Han population: a case control study Wu, Yimin Bai, Ming Yu, Yingnan Wang, Yupeng Zhang, Yuan J Orthop Surg Res Research Article BACKGROUND: Lumbar disc herniation (LDH) is a complex spinal disease, with multiple genetic polymorphisms being related to its risk. Nevertheless, the role of LINC-PINT polymorphisms in LDH risk has remained unknown. Therefore, this study aimed to investigate the association between LINC-PINT polymorphisms and LDH risk. METHODS: DNA was extracted from 504 LDH patients and 500 healthy controls. Three single nucleotide polymorphisms (SNPs) in LINC-PINT were selected and genotyped using Agena MassARRAY. We used logistic regression analysis to calculate odds ratios (ORs) and 95% confidence intervals (95% CIs) under multiple genetic models to evaluate the association between LINC-PINT polymorphisms and LDH risk. Haploview 4.2 and SNPStats software were used to evaluate the linkage strength of SNPs and the correlation between haplotypes and LDH risk. The impact of SNP-SNP interactions on LDH risk was analyzed using multi-factor dimensionality reduction (MDR). RESULTS: Results showed that rs157916 (G vs. A: OR = 1.23, FDR-p = 0.029) and rs7801029 (G vs. C: OR = 1.39, FDR-p = 0.006; GG vs. CC: OR = 2.34, FDR-p = 0.038; recessive: OR = 2.13, FDR-p = 0.045; additive: OR = 1.39, FDR-p = 0.030) were associated with an increased risk of LDH. Furthermore, LINC-PINT rs157916 and rs780129 were found to be significantly associated with LDH risk in males. The “GGG” haplotype was associated with increased LDH risk (OR = 1.41, FDR-p = 0.006). MDR analysis indicated that the interaction between rs7801029 and rs16873842 was associated with an increased risk of LDH (OR = 1.47, p = 0.004). Additionally, there were significant differences in C-reactive protein levels among different genotypes of rs157916 and rs780129 (p < 0.05). CONCLUSION: This study suggests that LINC-PINT gene polymorphisms (rs157916 and rs7801029) are considered risk factors for LDH in the Chinese Han population and provide a scientific basis for early screening, prevention, and diagnosis of LDH. BioMed Central 2023-08-08 /pmc/articles/PMC10410956/ /pubmed/37553573 http://dx.doi.org/10.1186/s13018-023-04052-5 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Article Wu, Yimin Bai, Ming Yu, Yingnan Wang, Yupeng Zhang, Yuan Association of LINC-PINT polymorphisms with lumbar disc herniation risk among Chinese Han population: a case control study |
title | Association of LINC-PINT polymorphisms with lumbar disc herniation risk among Chinese Han population: a case control study |
title_full | Association of LINC-PINT polymorphisms with lumbar disc herniation risk among Chinese Han population: a case control study |
title_fullStr | Association of LINC-PINT polymorphisms with lumbar disc herniation risk among Chinese Han population: a case control study |
title_full_unstemmed | Association of LINC-PINT polymorphisms with lumbar disc herniation risk among Chinese Han population: a case control study |
title_short | Association of LINC-PINT polymorphisms with lumbar disc herniation risk among Chinese Han population: a case control study |
title_sort | association of linc-pint polymorphisms with lumbar disc herniation risk among chinese han population: a case control study |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10410956/ https://www.ncbi.nlm.nih.gov/pubmed/37553573 http://dx.doi.org/10.1186/s13018-023-04052-5 |
work_keys_str_mv | AT wuyimin associationoflincpintpolymorphismswithlumbardischerniationriskamongchinesehanpopulationacasecontrolstudy AT baiming associationoflincpintpolymorphismswithlumbardischerniationriskamongchinesehanpopulationacasecontrolstudy AT yuyingnan associationoflincpintpolymorphismswithlumbardischerniationriskamongchinesehanpopulationacasecontrolstudy AT wangyupeng associationoflincpintpolymorphismswithlumbardischerniationriskamongchinesehanpopulationacasecontrolstudy AT zhangyuan associationoflincpintpolymorphismswithlumbardischerniationriskamongchinesehanpopulationacasecontrolstudy |