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Role of Matrix-Assisted Laser Desorption Ionization–Time-of-Flight Mass Spectrometry for Species Identification of Acinetobacter Strains

Introduction   Acinetobacter species has become a leading cause of nosocomial infections in recent years. Objectives  The aim of the study was to establish the usefulness of matrix-assisted laser desorption ionization–time-of-flight (MALDI-TOF) mass spectrometry (MS) for the identification of Acinet...

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Autores principales: Krishnaraj, Anusha, Gupta, Pratima, Bhatia, Mohit, Omar, Balram Ji
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Thieme Medical and Scientific Publishers Pvt. Ltd. 2023
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10411205/
https://www.ncbi.nlm.nih.gov/pubmed/37564221
http://dx.doi.org/10.1055/s-0042-1760401
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author Krishnaraj, Anusha
Gupta, Pratima
Bhatia, Mohit
Omar, Balram Ji
author_facet Krishnaraj, Anusha
Gupta, Pratima
Bhatia, Mohit
Omar, Balram Ji
author_sort Krishnaraj, Anusha
collection PubMed
description Introduction   Acinetobacter species has become a leading cause of nosocomial infections in recent years. Objectives  The aim of the study was to establish the usefulness of matrix-assisted laser desorption ionization–time-of-flight (MALDI-TOF) mass spectrometry (MS) for the identification of Acinetobacter species with respect to conventional biochemical methods and MicroScan WalkAway 96 Plus system and to compare the antibiotic susceptibility test results Kirby–Bauer disk diffusion method with MicroScan WalkAway 96 Plus automated identification and antimicrobial susceptibility testing system. Materials and Methods  The study sample comprised 100 clinical isolates of Acinetobacter species. They were all identified using MALDI-TOF MS and compared with other two identification systems. Statistical Analysis  Comparison of categorical variables by Fisher's exact test or Pearson's chi-square test was done. All statistical tools were two tailed, and a significant level p  < 0.05 was used. All statistical tests were performed using SPSS v22.0 (Armonk IBM Corp., New York, United States). Cohen's kappa coefficients were also calculated and used as applicable. Results  MALDI-TOF MS revealed 92 A. baumannii , 2 Acinetobacter nosocomialis , 3 Acinetobacter lwoffii , and 1 each was identified as Acinetobacter junii , Acinetobacter johnsonii , and Acinetobacter tandoii . There was moderate agreement between identification by MicroScan WalkAway and MALDI-TOF, and substantial agreement between conventional biochemical tests and MALDI-TOF. We found that there was a 100% categorical agreement with respect to susceptibility of aminoglycosides (amikacin, gentamicin, tobramycin) and cephalosporins (ceftazidime, cefepime, cefotaxime) between disk diffusion method and MicroScan WalkAway 96 Plus system. Total of 16 errors were observed. Conclusion  Although MALDI-TOF MS could be useful to identify A. baumannii but not other species in the genus, it is a rapid, reliable method and can be routinely used in clinical laboratories.
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spelling pubmed-104112052023-08-10 Role of Matrix-Assisted Laser Desorption Ionization–Time-of-Flight Mass Spectrometry for Species Identification of Acinetobacter Strains Krishnaraj, Anusha Gupta, Pratima Bhatia, Mohit Omar, Balram Ji J Lab Physicians Introduction   Acinetobacter species has become a leading cause of nosocomial infections in recent years. Objectives  The aim of the study was to establish the usefulness of matrix-assisted laser desorption ionization–time-of-flight (MALDI-TOF) mass spectrometry (MS) for the identification of Acinetobacter species with respect to conventional biochemical methods and MicroScan WalkAway 96 Plus system and to compare the antibiotic susceptibility test results Kirby–Bauer disk diffusion method with MicroScan WalkAway 96 Plus automated identification and antimicrobial susceptibility testing system. Materials and Methods  The study sample comprised 100 clinical isolates of Acinetobacter species. They were all identified using MALDI-TOF MS and compared with other two identification systems. Statistical Analysis  Comparison of categorical variables by Fisher's exact test or Pearson's chi-square test was done. All statistical tools were two tailed, and a significant level p  < 0.05 was used. All statistical tests were performed using SPSS v22.0 (Armonk IBM Corp., New York, United States). Cohen's kappa coefficients were also calculated and used as applicable. Results  MALDI-TOF MS revealed 92 A. baumannii , 2 Acinetobacter nosocomialis , 3 Acinetobacter lwoffii , and 1 each was identified as Acinetobacter junii , Acinetobacter johnsonii , and Acinetobacter tandoii . There was moderate agreement between identification by MicroScan WalkAway and MALDI-TOF, and substantial agreement between conventional biochemical tests and MALDI-TOF. We found that there was a 100% categorical agreement with respect to susceptibility of aminoglycosides (amikacin, gentamicin, tobramycin) and cephalosporins (ceftazidime, cefepime, cefotaxime) between disk diffusion method and MicroScan WalkAway 96 Plus system. Total of 16 errors were observed. Conclusion  Although MALDI-TOF MS could be useful to identify A. baumannii but not other species in the genus, it is a rapid, reliable method and can be routinely used in clinical laboratories. Thieme Medical and Scientific Publishers Pvt. Ltd. 2023-01-18 /pmc/articles/PMC10411205/ /pubmed/37564221 http://dx.doi.org/10.1055/s-0042-1760401 Text en The Indian Association of Laboratory Physicians. This is an open access article published by Thieme under the terms of the Creative Commons Attribution-NonDerivative-NonCommercial License, permitting copying and reproduction so long as the original work is given appropriate credit. Contents may not be used for commercial purposes, or adapted, remixed, transformed or built upon. ( https://creativecommons.org/licenses/by-nc-nd/4.0/ ) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivatives License, which permits unrestricted reproduction and distribution, for non-commercial purposes only; and use and reproduction, but not distribution, of adapted material for non-commercial purposes only, provided the original work is properly cited.
spellingShingle Krishnaraj, Anusha
Gupta, Pratima
Bhatia, Mohit
Omar, Balram Ji
Role of Matrix-Assisted Laser Desorption Ionization–Time-of-Flight Mass Spectrometry for Species Identification of Acinetobacter Strains
title Role of Matrix-Assisted Laser Desorption Ionization–Time-of-Flight Mass Spectrometry for Species Identification of Acinetobacter Strains
title_full Role of Matrix-Assisted Laser Desorption Ionization–Time-of-Flight Mass Spectrometry for Species Identification of Acinetobacter Strains
title_fullStr Role of Matrix-Assisted Laser Desorption Ionization–Time-of-Flight Mass Spectrometry for Species Identification of Acinetobacter Strains
title_full_unstemmed Role of Matrix-Assisted Laser Desorption Ionization–Time-of-Flight Mass Spectrometry for Species Identification of Acinetobacter Strains
title_short Role of Matrix-Assisted Laser Desorption Ionization–Time-of-Flight Mass Spectrometry for Species Identification of Acinetobacter Strains
title_sort role of matrix-assisted laser desorption ionization–time-of-flight mass spectrometry for species identification of acinetobacter strains
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10411205/
https://www.ncbi.nlm.nih.gov/pubmed/37564221
http://dx.doi.org/10.1055/s-0042-1760401
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