Cargando…

Challenges in using transcriptome data to study the c-di-GMP signaling network in Pseudomonas aeruginosa clinical isolates

In the Pseudomonas aeruginosa type strain PA14, 40 genes are known to encode for diguanylate cyclases (DGCs) and/or phosphodiesterases (PDEs), which modulate the intracellular pool of the nucleotide second messenger c-di-GMP. While in general, high levels of c-di-GMP drive the switch from highly mot...

Descripción completa

Detalles Bibliográficos
Autores principales:	Gür, Melisa, Erdmann, Jelena, Will, Anke, Liang, Ziwei, Andersen, Jens Bo, Tolker-Nielsen, Tim, Häussler, Susanne
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2023
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10411656/ https://www.ncbi.nlm.nih.gov/pubmed/37564278 http://dx.doi.org/10.1093/femsmc/xtad012

Ejemplares similares

Transcription of the Alginate Operon in Pseudomonas aeruginosa Is Regulated by c-di-GMP
por: Liang, Ziwei, et al.
Publicado: (2022)

Identification of small molecules that interfere with c-di-GMP signaling and induce dispersal of Pseudomonas aeruginosa biofilms
por: Andersen, Jens Bo, et al.
Publicado: (2021)

C-di-GMP regulates Pseudomonas aeruginosa stress response to tellurite during both planktonic and biofilm modes of growth
por: Chua, Song Lin, et al.
Publicado: (2015)

Reduced Intracellular c-di-GMP Content Increases Expression of Quorum Sensing-Regulated Genes in Pseudomonas aeruginosa
por: Lin Chua, Song, et al.
Publicado: (2017)

The role of individual exopolysaccharides in antibiotic tolerance of Pseudomonas aeruginosa aggregates
por: Liang, Ziwei, et al.
Publicado: (2023)

Biofilms and Cyclic di-GMP (c-di-GMP) Signaling: Lessons from Pseudomonas aeruginosa and Other Bacteria
por: Valentini, Martina, et al.
Publicado: (2016)

Elevated c-di-GMP Levels and Expression of the Type III Secretion System Promote Corneal Infection by Pseudomonas aeruginosa
por: Yam, Joey Kuok Hoong, et al.
Publicado: (2022)

Tolerance and Resistance of Pseudomonas aeruginosa Biofilms to Antimicrobial Agents—How P. aeruginosa Can Escape Antibiotics
por: Ciofu, Oana, et al.
Publicado: (2019)

The Oxidative Stress Agent Hypochlorite Stimulates c-di-GMP Synthesis and Biofilm Formation in Pseudomonas aeruginosa
por: Strempel, Nikola, et al.
Publicado: (2017)

Bacteriophage‐mediated interference of the c‐di‐GMP signalling pathway in Pseudomonas aeruginosa
por: De Smet, Jeroen, et al.
Publicado: (2020)

Terrein is an inhibitor of quorum sensing and c-di-GMP in Pseudomonas aeruginosa: a connection between quorum sensing and c-di-GMP
por: Kim, Bomin, et al.
Publicado: (2018)

The Core Proteome of Biofilm-Grown Clinical Pseudomonas aeruginosa Isolates
por: Erdmann, Jelena, et al.
Publicado: (2019)

Key Players and Individualists of Cyclic-di-GMP Signaling in Burkholderia cenocepacia
por: Richter, Anja M., et al.
Publicado: (2019)

Cyclic-di-GMP regulates lipopolysaccharide modification and contributes to Pseudomonas aeruginosa immune evasion
por: McCarthy, Ronan R., et al.
Publicado: (2017)

Distinct Long- and Short-Term Adaptive Mechanisms in Pseudomonas aeruginosa
por: Koska, Michal, et al.
Publicado: (2022)

Antisense transcription in Pseudomonas aeruginosa
por: Eckweiler, Denitsa, et al.
Publicado: (2018)

BrlR from Pseudomonas aeruginosa is a receptor for both cyclic di-GMP and pyocyanin
por: Wang, Feng, et al.
Publicado: (2018)

A novel c-di-GMP signal system regulates biofilm formation in Pseudomonas aeruginosa
por: Chen, Gukui, et al.
Publicado: (2020)

The effect of Cyclic-di-GMP on biofilm formation by Pseudomonas aeruginosa in a novel empyema model
por: Zhang, Li, et al.
Publicado: (2020)

Specific Control of Pseudomonas aeruginosa Surface-Associated Behaviors by Two c-di-GMP Diguanylate Cyclases
por: Merritt, Judith H., et al.
Publicado: (2010)

Pseudomonas aeruginosa uses a cyclic-di-GMP-regulated adhesin to reinforce the biofilm extracellular matrix
por: Borlee, Bradley R, et al.
Publicado: (2010)

Influence of High Intensity Focused Ultrasound on the Microstructure and c-di-GMP Signaling of Pseudomonas aeruginosa Biofilms
por: Bharatula, Lakshmi Deepika, et al.
Publicado: (2020)

Bicarbonate Evokes Reciprocal Changes in Intracellular Cyclic di-GMP and Cyclic AMP Levels in Pseudomonas aeruginosa
por: Ruksakiet, Kasidid, et al.
Publicado: (2021)

The accumulation and growth of Pseudomonas aeruginosa on surfaces is modulated by surface mechanics via cyclic-di-GMP signaling
por: Wang, Liyun, et al.
Publicado: (2023)

Immune Responses to Pseudomonas aeruginosa Biofilm Infections
por: Moser, Claus, et al.
Publicado: (2021)

The Pseudomonas Quinolone Signal (PQS) Balances Life and Death in Pseudomonas aeruginosa Populations
por: Häussler, Susanne, et al.
Publicado: (2008)

Characterization of a soluble library of the Pseudomonas aeruginosa PAO1 membrane proteome with emphasis on c-di-GMP turnover enzymes
por: Scherhag, Anna, et al.
Publicado: (2023)

YfiBNR Mediates Cyclic di-GMP Dependent Small Colony Variant Formation and Persistence in Pseudomonas aeruginosa
por: Malone, Jacob G., et al.
Publicado: (2010)

Regulation of Exopolysaccharide Production by ProE, a Cyclic-Di-GMP Phosphodiesterase in Pseudomonas aeruginosa PAO1
por: Feng, Qishun, et al.
Publicado: (2020)

Pseudomonas aeruginosa Uses c-di-GMP Phosphodiesterases RmcA and MorA To Regulate Biofilm Maintenance
por: Katharios-Lanwermeyer, S., et al.
Publicado: (2021)

ToxR is a c-di-GMP binding protein that modulates surface-associated behaviour in Pseudomonas aeruginosa
por: Dubern, Jean-Frédéric, et al.
Publicado: (2022)

The LapG protein plays a role in Pseudomonas aeruginosa biofilm formation by controlling the presence of the CdrA adhesin on the cell surface
por: Rybtke, Morten, et al.
Publicado: (2015)

Regulation of Burkholderia cenocepacia biofilm formation by RpoN and the c‐di‐GMP effector BerB
por: Fazli, Mustafa, et al.
Publicado: (2017)

The Pseudomonas aeruginosa Transcriptome in Planktonic Cultures and Static Biofilms Using RNA Sequencing
por: Dötsch, Andreas, et al.
Publicado: (2012)

The exopolysaccharide gene cluster Bcam1330–Bcam1341 is involved in Burkholderia cenocepacia biofilm formation, and its expression is regulated by c-di-GMP and Bcam1349
por: Fazli, Mustafa, et al.
Publicado: (2013)

Regulation of Motility and Phenazine Pigment Production by FliA Is Cyclic-di-GMP Dependent in Pseudomonas aeruginosa PAO1
por: Lo, Yi-Ling, et al.
Publicado: (2016)

ChIP-seq reveals the global regulator AlgR mediating cyclic di-GMP synthesis in Pseudomonas aeruginosa
por: Kong, Weina, et al.
Publicado: (2015)

Establishment of a High-throughput Setup for Screening Small Molecules That Modulate c-di-GMP Signaling in Pseudomonas aeruginosa
por: Rugjee, Kushal N., et al.
Publicado: (2016)

Pleiotropic Effects of c-di-GMP Content in Pseudomonas syringae
por: Wang, Tingting, et al.
Publicado: (2019)

Transcriptome Dynamics of Pseudomonas aeruginosa during Transition from Overlapping To Non-Overlapping Cell Cycles
por: Alpers, Kathrin, et al.
Publicado: (2023)

Cannot write session to /tmp/vufind_sessions/sess_7a90k8k147fd55i0mg5nrkkola