Cargando…
Overexpression of MRPL19 in predicting poor prognosis and promoting the development of lung adenocarcinoma
BACKGROUND: Mitochondrial ribosomal protein L19 (MRPL19) is a member of the mitochondrial ribosomal protein (MRP) family. MRPs have a role in the progression of many cancers. However, the role of MRPL19 in lung adenocarcinoma (LUAD) is yet unknown. METHODS: The Cancer Genome Atlas (TCGA) and Gene Ex...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
AME Publishing Company
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10413030/ https://www.ncbi.nlm.nih.gov/pubmed/37577299 http://dx.doi.org/10.21037/tlcr-23-306 |
_version_ | 1785087045930057728 |
---|---|
author | Wei, Dong Sun, Daqiang Sirera, Rafael Afzal, Muhammad Zubair Leong, Tracy L. Li, Xin Wang, Yuhang |
author_facet | Wei, Dong Sun, Daqiang Sirera, Rafael Afzal, Muhammad Zubair Leong, Tracy L. Li, Xin Wang, Yuhang |
author_sort | Wei, Dong |
collection | PubMed |
description | BACKGROUND: Mitochondrial ribosomal protein L19 (MRPL19) is a member of the mitochondrial ribosomal protein (MRP) family. MRPs have a role in the progression of many cancers. However, the role of MRPL19 in lung adenocarcinoma (LUAD) is yet unknown. METHODS: The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) datasets, real-time polymerase chain reaction, and immunohistochemistry (IHC) were used to assess MRPL19 expression and clinical relevance. Gene Expression Profiling Interactive Analysis (GEPIA) and the online Kaplan-Meier (KM) Plotter database were used to determine the prognostic significance. Through use of LinkedOmics, genes that were coexpressed with MRPL19 and its regulators were identified. The biological roles of MRPL19 were investigated through R-implemented packages and RNA interference. The Tumor Immune Estimation Resource (TIMER) was employed to assess the connection between MRPL19 expression and infiltrated immune cells in LUAD. RESULTS: MRPL19 expression in LUAD was upregulated and was correlated with lymph node metastasis, differentiation level, and tumor status. MRPL19 was prognostic and associated with poor prognosis. Functional network analysis revealed that MRPL19 may be associated with the cell cycle, cell adhesion molecules, spliceosome, and T-helper cell differentiation and was regulated by several microRNA and the E2F family. The gene set enrichment analysis (GSEA) and protein-protein interaction (PPI) network indicated that MRPL19 was correlated with cancer proliferation signaling pathways. The immune infiltration analysis revealed a correlation between MRPL19 expression and the extent of B cells, CD4(+) T cells, and dendritic cells’ infiltration in LUAD. Additionally, MRPL19 knockdown in LUAD cells substantially reduced cell growth, migration, and invasion of malignant cells. CONCLUSIONS: The poor prognosis and immunological infiltration in LUAD were significantly associated with MRPL19, which may have pro-oncogenic effects on the disease. |
format | Online Article Text |
id | pubmed-10413030 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | AME Publishing Company |
record_format | MEDLINE/PubMed |
spelling | pubmed-104130302023-08-11 Overexpression of MRPL19 in predicting poor prognosis and promoting the development of lung adenocarcinoma Wei, Dong Sun, Daqiang Sirera, Rafael Afzal, Muhammad Zubair Leong, Tracy L. Li, Xin Wang, Yuhang Transl Lung Cancer Res Original Article BACKGROUND: Mitochondrial ribosomal protein L19 (MRPL19) is a member of the mitochondrial ribosomal protein (MRP) family. MRPs have a role in the progression of many cancers. However, the role of MRPL19 in lung adenocarcinoma (LUAD) is yet unknown. METHODS: The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) datasets, real-time polymerase chain reaction, and immunohistochemistry (IHC) were used to assess MRPL19 expression and clinical relevance. Gene Expression Profiling Interactive Analysis (GEPIA) and the online Kaplan-Meier (KM) Plotter database were used to determine the prognostic significance. Through use of LinkedOmics, genes that were coexpressed with MRPL19 and its regulators were identified. The biological roles of MRPL19 were investigated through R-implemented packages and RNA interference. The Tumor Immune Estimation Resource (TIMER) was employed to assess the connection between MRPL19 expression and infiltrated immune cells in LUAD. RESULTS: MRPL19 expression in LUAD was upregulated and was correlated with lymph node metastasis, differentiation level, and tumor status. MRPL19 was prognostic and associated with poor prognosis. Functional network analysis revealed that MRPL19 may be associated with the cell cycle, cell adhesion molecules, spliceosome, and T-helper cell differentiation and was regulated by several microRNA and the E2F family. The gene set enrichment analysis (GSEA) and protein-protein interaction (PPI) network indicated that MRPL19 was correlated with cancer proliferation signaling pathways. The immune infiltration analysis revealed a correlation between MRPL19 expression and the extent of B cells, CD4(+) T cells, and dendritic cells’ infiltration in LUAD. Additionally, MRPL19 knockdown in LUAD cells substantially reduced cell growth, migration, and invasion of malignant cells. CONCLUSIONS: The poor prognosis and immunological infiltration in LUAD were significantly associated with MRPL19, which may have pro-oncogenic effects on the disease. AME Publishing Company 2023-07-19 2023-07-31 /pmc/articles/PMC10413030/ /pubmed/37577299 http://dx.doi.org/10.21037/tlcr-23-306 Text en 2023 Translational Lung Cancer Research. All rights reserved. https://creativecommons.org/licenses/by-nc-nd/4.0/Open Access Statement: This is an Open Access article distributed in accordance with the Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License (CC BY-NC-ND 4.0), which permits the non-commercial replication and distribution of the article with the strict proviso that no changes or edits are made and the original work is properly cited (including links to both the formal publication through the relevant DOI and the license). See: https://creativecommons.org/licenses/by-nc-nd/4.0 (https://creativecommons.org/licenses/by-nc-nd/4.0/) . |
spellingShingle | Original Article Wei, Dong Sun, Daqiang Sirera, Rafael Afzal, Muhammad Zubair Leong, Tracy L. Li, Xin Wang, Yuhang Overexpression of MRPL19 in predicting poor prognosis and promoting the development of lung adenocarcinoma |
title | Overexpression of MRPL19 in predicting poor prognosis and promoting the development of lung adenocarcinoma |
title_full | Overexpression of MRPL19 in predicting poor prognosis and promoting the development of lung adenocarcinoma |
title_fullStr | Overexpression of MRPL19 in predicting poor prognosis and promoting the development of lung adenocarcinoma |
title_full_unstemmed | Overexpression of MRPL19 in predicting poor prognosis and promoting the development of lung adenocarcinoma |
title_short | Overexpression of MRPL19 in predicting poor prognosis and promoting the development of lung adenocarcinoma |
title_sort | overexpression of mrpl19 in predicting poor prognosis and promoting the development of lung adenocarcinoma |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10413030/ https://www.ncbi.nlm.nih.gov/pubmed/37577299 http://dx.doi.org/10.21037/tlcr-23-306 |
work_keys_str_mv | AT weidong overexpressionofmrpl19inpredictingpoorprognosisandpromotingthedevelopmentoflungadenocarcinoma AT sundaqiang overexpressionofmrpl19inpredictingpoorprognosisandpromotingthedevelopmentoflungadenocarcinoma AT sirerarafael overexpressionofmrpl19inpredictingpoorprognosisandpromotingthedevelopmentoflungadenocarcinoma AT afzalmuhammadzubair overexpressionofmrpl19inpredictingpoorprognosisandpromotingthedevelopmentoflungadenocarcinoma AT leongtracyl overexpressionofmrpl19inpredictingpoorprognosisandpromotingthedevelopmentoflungadenocarcinoma AT lixin overexpressionofmrpl19inpredictingpoorprognosisandpromotingthedevelopmentoflungadenocarcinoma AT wangyuhang overexpressionofmrpl19inpredictingpoorprognosisandpromotingthedevelopmentoflungadenocarcinoma |