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A bacterial tungsten-containing aldehyde oxidoreductase forms an enzymatic decorated protein nanowire
Aldehyde oxidoreductases (AORs) are tungsten enzymes catalyzing the oxidation of many different aldehydes to the corresponding carboxylic acids. In contrast to other known AORs, the enzyme from the denitrifying betaproteobacterium Aromatoleum aromaticum (AOR(Aa)) consists of three different subunits...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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American Association for the Advancement of Science
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10413684/ https://www.ncbi.nlm.nih.gov/pubmed/37267359 http://dx.doi.org/10.1126/sciadv.adg6689 |
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author | Winiarska, Agnieszka Ramírez-Amador, Fidel Hege, Dominik Gemmecker, Yvonne Prinz, Simone Hochberg, Georg Heider, Johann Szaleniec, Maciej Schuller, Jan Michael |
author_facet | Winiarska, Agnieszka Ramírez-Amador, Fidel Hege, Dominik Gemmecker, Yvonne Prinz, Simone Hochberg, Georg Heider, Johann Szaleniec, Maciej Schuller, Jan Michael |
author_sort | Winiarska, Agnieszka |
collection | PubMed |
description | Aldehyde oxidoreductases (AORs) are tungsten enzymes catalyzing the oxidation of many different aldehydes to the corresponding carboxylic acids. In contrast to other known AORs, the enzyme from the denitrifying betaproteobacterium Aromatoleum aromaticum (AOR(Aa)) consists of three different subunits (AorABC) and uses nicotinamide adenine dinucleotide (NAD) as an electron acceptor. Here, we reveal that the enzyme forms filaments of repeating AorAB protomers that are capped by a single NAD-binding AorC subunit, based on solving its structure via cryo–electron microscopy. The polyferredoxin-like subunit AorA oligomerizes to an electron-conducting nanowire that is decorated with enzymatically active and W-cofactor (W-co) containing AorB subunits. Our structure further reveals the binding mode of the native substrate benzoate in the AorB active site. This, together with quantum mechanics:molecular mechanics (QM:MM)–based modeling for the coordination of the W-co, enables formulation of a hypothetical catalytic mechanism that paves the way to further engineering for applications in synthetic biology and biotechnology. |
format | Online Article Text |
id | pubmed-10413684 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | American Association for the Advancement of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-104136842023-08-11 A bacterial tungsten-containing aldehyde oxidoreductase forms an enzymatic decorated protein nanowire Winiarska, Agnieszka Ramírez-Amador, Fidel Hege, Dominik Gemmecker, Yvonne Prinz, Simone Hochberg, Georg Heider, Johann Szaleniec, Maciej Schuller, Jan Michael Sci Adv Biomedicine and Life Sciences Aldehyde oxidoreductases (AORs) are tungsten enzymes catalyzing the oxidation of many different aldehydes to the corresponding carboxylic acids. In contrast to other known AORs, the enzyme from the denitrifying betaproteobacterium Aromatoleum aromaticum (AOR(Aa)) consists of three different subunits (AorABC) and uses nicotinamide adenine dinucleotide (NAD) as an electron acceptor. Here, we reveal that the enzyme forms filaments of repeating AorAB protomers that are capped by a single NAD-binding AorC subunit, based on solving its structure via cryo–electron microscopy. The polyferredoxin-like subunit AorA oligomerizes to an electron-conducting nanowire that is decorated with enzymatically active and W-cofactor (W-co) containing AorB subunits. Our structure further reveals the binding mode of the native substrate benzoate in the AorB active site. This, together with quantum mechanics:molecular mechanics (QM:MM)–based modeling for the coordination of the W-co, enables formulation of a hypothetical catalytic mechanism that paves the way to further engineering for applications in synthetic biology and biotechnology. American Association for the Advancement of Science 2023-06-02 /pmc/articles/PMC10413684/ /pubmed/37267359 http://dx.doi.org/10.1126/sciadv.adg6689 Text en Copyright © 2023 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works. Distributed under a Creative Commons Attribution License 4.0 (CC BY). https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution license (https://creativecommons.org/licenses/by/4.0/) , which permits which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Biomedicine and Life Sciences Winiarska, Agnieszka Ramírez-Amador, Fidel Hege, Dominik Gemmecker, Yvonne Prinz, Simone Hochberg, Georg Heider, Johann Szaleniec, Maciej Schuller, Jan Michael A bacterial tungsten-containing aldehyde oxidoreductase forms an enzymatic decorated protein nanowire |
title | A bacterial tungsten-containing aldehyde oxidoreductase forms an enzymatic decorated protein nanowire |
title_full | A bacterial tungsten-containing aldehyde oxidoreductase forms an enzymatic decorated protein nanowire |
title_fullStr | A bacterial tungsten-containing aldehyde oxidoreductase forms an enzymatic decorated protein nanowire |
title_full_unstemmed | A bacterial tungsten-containing aldehyde oxidoreductase forms an enzymatic decorated protein nanowire |
title_short | A bacterial tungsten-containing aldehyde oxidoreductase forms an enzymatic decorated protein nanowire |
title_sort | bacterial tungsten-containing aldehyde oxidoreductase forms an enzymatic decorated protein nanowire |
topic | Biomedicine and Life Sciences |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10413684/ https://www.ncbi.nlm.nih.gov/pubmed/37267359 http://dx.doi.org/10.1126/sciadv.adg6689 |
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