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A bacterial tungsten-containing aldehyde oxidoreductase forms an enzymatic decorated protein nanowire

Aldehyde oxidoreductases (AORs) are tungsten enzymes catalyzing the oxidation of many different aldehydes to the corresponding carboxylic acids. In contrast to other known AORs, the enzyme from the denitrifying betaproteobacterium Aromatoleum aromaticum (AOR(Aa)) consists of three different subunits...

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Autores principales: Winiarska, Agnieszka, Ramírez-Amador, Fidel, Hege, Dominik, Gemmecker, Yvonne, Prinz, Simone, Hochberg, Georg, Heider, Johann, Szaleniec, Maciej, Schuller, Jan Michael
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Association for the Advancement of Science 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10413684/
https://www.ncbi.nlm.nih.gov/pubmed/37267359
http://dx.doi.org/10.1126/sciadv.adg6689
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author Winiarska, Agnieszka
Ramírez-Amador, Fidel
Hege, Dominik
Gemmecker, Yvonne
Prinz, Simone
Hochberg, Georg
Heider, Johann
Szaleniec, Maciej
Schuller, Jan Michael
author_facet Winiarska, Agnieszka
Ramírez-Amador, Fidel
Hege, Dominik
Gemmecker, Yvonne
Prinz, Simone
Hochberg, Georg
Heider, Johann
Szaleniec, Maciej
Schuller, Jan Michael
author_sort Winiarska, Agnieszka
collection PubMed
description Aldehyde oxidoreductases (AORs) are tungsten enzymes catalyzing the oxidation of many different aldehydes to the corresponding carboxylic acids. In contrast to other known AORs, the enzyme from the denitrifying betaproteobacterium Aromatoleum aromaticum (AOR(Aa)) consists of three different subunits (AorABC) and uses nicotinamide adenine dinucleotide (NAD) as an electron acceptor. Here, we reveal that the enzyme forms filaments of repeating AorAB protomers that are capped by a single NAD-binding AorC subunit, based on solving its structure via cryo–electron microscopy. The polyferredoxin-like subunit AorA oligomerizes to an electron-conducting nanowire that is decorated with enzymatically active and W-cofactor (W-co) containing AorB subunits. Our structure further reveals the binding mode of the native substrate benzoate in the AorB active site. This, together with quantum mechanics:molecular mechanics (QM:MM)–based modeling for the coordination of the W-co, enables formulation of a hypothetical catalytic mechanism that paves the way to further engineering for applications in synthetic biology and biotechnology.
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spelling pubmed-104136842023-08-11 A bacterial tungsten-containing aldehyde oxidoreductase forms an enzymatic decorated protein nanowire Winiarska, Agnieszka Ramírez-Amador, Fidel Hege, Dominik Gemmecker, Yvonne Prinz, Simone Hochberg, Georg Heider, Johann Szaleniec, Maciej Schuller, Jan Michael Sci Adv Biomedicine and Life Sciences Aldehyde oxidoreductases (AORs) are tungsten enzymes catalyzing the oxidation of many different aldehydes to the corresponding carboxylic acids. In contrast to other known AORs, the enzyme from the denitrifying betaproteobacterium Aromatoleum aromaticum (AOR(Aa)) consists of three different subunits (AorABC) and uses nicotinamide adenine dinucleotide (NAD) as an electron acceptor. Here, we reveal that the enzyme forms filaments of repeating AorAB protomers that are capped by a single NAD-binding AorC subunit, based on solving its structure via cryo–electron microscopy. The polyferredoxin-like subunit AorA oligomerizes to an electron-conducting nanowire that is decorated with enzymatically active and W-cofactor (W-co) containing AorB subunits. Our structure further reveals the binding mode of the native substrate benzoate in the AorB active site. This, together with quantum mechanics:molecular mechanics (QM:MM)–based modeling for the coordination of the W-co, enables formulation of a hypothetical catalytic mechanism that paves the way to further engineering for applications in synthetic biology and biotechnology. American Association for the Advancement of Science 2023-06-02 /pmc/articles/PMC10413684/ /pubmed/37267359 http://dx.doi.org/10.1126/sciadv.adg6689 Text en Copyright © 2023 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works. Distributed under a Creative Commons Attribution License 4.0 (CC BY). https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution license (https://creativecommons.org/licenses/by/4.0/) , which permits which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Biomedicine and Life Sciences
Winiarska, Agnieszka
Ramírez-Amador, Fidel
Hege, Dominik
Gemmecker, Yvonne
Prinz, Simone
Hochberg, Georg
Heider, Johann
Szaleniec, Maciej
Schuller, Jan Michael
A bacterial tungsten-containing aldehyde oxidoreductase forms an enzymatic decorated protein nanowire
title A bacterial tungsten-containing aldehyde oxidoreductase forms an enzymatic decorated protein nanowire
title_full A bacterial tungsten-containing aldehyde oxidoreductase forms an enzymatic decorated protein nanowire
title_fullStr A bacterial tungsten-containing aldehyde oxidoreductase forms an enzymatic decorated protein nanowire
title_full_unstemmed A bacterial tungsten-containing aldehyde oxidoreductase forms an enzymatic decorated protein nanowire
title_short A bacterial tungsten-containing aldehyde oxidoreductase forms an enzymatic decorated protein nanowire
title_sort bacterial tungsten-containing aldehyde oxidoreductase forms an enzymatic decorated protein nanowire
topic Biomedicine and Life Sciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10413684/
https://www.ncbi.nlm.nih.gov/pubmed/37267359
http://dx.doi.org/10.1126/sciadv.adg6689
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