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Identification and validation of a novel overall survival prediction model for immune-related genes in bone metastases of prostate cancer

Immunotherapy has become a revolutionary treatment for cancer and brought new vitality to tumor immunity. Bone metastases are the most prevalent metastatic site for advanced prostate cancer (PCa). Therefore, finding new immunotherapy targets in PCa patients with bone metastasis is urgently needed. W...

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Detalles Bibliográficos
Autores principales: Bi, Wen, Guo, Weiming, Fan, Gang, Xie, Lei, Jiang, Changqing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10415549/
https://www.ncbi.nlm.nih.gov/pubmed/37494663
http://dx.doi.org/10.18632/aging.204900
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author Bi, Wen
Guo, Weiming
Fan, Gang
Xie, Lei
Jiang, Changqing
author_facet Bi, Wen
Guo, Weiming
Fan, Gang
Xie, Lei
Jiang, Changqing
author_sort Bi, Wen
collection PubMed
description Immunotherapy has become a revolutionary treatment for cancer and brought new vitality to tumor immunity. Bone metastases are the most prevalent metastatic site for advanced prostate cancer (PCa). Therefore, finding new immunotherapy targets in PCa patients with bone metastasis is urgently needed. We conducted an elaborative bioinformatics study of immune-related genes (IRGs) and tumor-infiltrating immune cells (TIICs) in PCa bone metastases. Databases were integrated to obtain RNA-sequencing data and clinical prognostic information. Univariate and multivariate Cox regression analyses were conducted to construct an overall survival (OS) prediction model. GSE32269 was analyzed to acquire differentially expressed IRGs. The OS prediction model was established by employing six IRGs (MAVS, HSP90AA1, FCGR3A, CTSB, FCER1G, and CD4). The CIBERSORT algorithm was adopted to assess the proportion of TIICs in each group. Furthermore, Transwell, MTT, and wound healing assays were employed to determine the effect of MAVS on PCa cells. High-risk patients had worse OS compared to the low-risk patients in the training and validation cohorts. Meanwhile, clinically practical nomograms were generated using these identified IRGs to predict the 3- and 5-year survival rates of patients. The infiltration percentages of some TIICs were closely linked to the risk score of the OS prediction model. Some tumor-infiltrating immune cells were related to the OS. FCGR3A was closely correlated with some TIICs. In vitro experiments verified that up-regulation of MAVS suppressed the proliferation and metastatic abilities of PCa cells. Our work presented a thorough interpretation of TIICs and IRGs for illustrating and discovering new potential immune checkpoints in bone metastases of PCa.
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spelling pubmed-104155492023-08-12 Identification and validation of a novel overall survival prediction model for immune-related genes in bone metastases of prostate cancer Bi, Wen Guo, Weiming Fan, Gang Xie, Lei Jiang, Changqing Aging (Albany NY) Research Paper Immunotherapy has become a revolutionary treatment for cancer and brought new vitality to tumor immunity. Bone metastases are the most prevalent metastatic site for advanced prostate cancer (PCa). Therefore, finding new immunotherapy targets in PCa patients with bone metastasis is urgently needed. We conducted an elaborative bioinformatics study of immune-related genes (IRGs) and tumor-infiltrating immune cells (TIICs) in PCa bone metastases. Databases were integrated to obtain RNA-sequencing data and clinical prognostic information. Univariate and multivariate Cox regression analyses were conducted to construct an overall survival (OS) prediction model. GSE32269 was analyzed to acquire differentially expressed IRGs. The OS prediction model was established by employing six IRGs (MAVS, HSP90AA1, FCGR3A, CTSB, FCER1G, and CD4). The CIBERSORT algorithm was adopted to assess the proportion of TIICs in each group. Furthermore, Transwell, MTT, and wound healing assays were employed to determine the effect of MAVS on PCa cells. High-risk patients had worse OS compared to the low-risk patients in the training and validation cohorts. Meanwhile, clinically practical nomograms were generated using these identified IRGs to predict the 3- and 5-year survival rates of patients. The infiltration percentages of some TIICs were closely linked to the risk score of the OS prediction model. Some tumor-infiltrating immune cells were related to the OS. FCGR3A was closely correlated with some TIICs. In vitro experiments verified that up-regulation of MAVS suppressed the proliferation and metastatic abilities of PCa cells. Our work presented a thorough interpretation of TIICs and IRGs for illustrating and discovering new potential immune checkpoints in bone metastases of PCa. Impact Journals 2023-07-25 /pmc/articles/PMC10415549/ /pubmed/37494663 http://dx.doi.org/10.18632/aging.204900 Text en Copyright: © 2023 Bi et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Bi, Wen
Guo, Weiming
Fan, Gang
Xie, Lei
Jiang, Changqing
Identification and validation of a novel overall survival prediction model for immune-related genes in bone metastases of prostate cancer
title Identification and validation of a novel overall survival prediction model for immune-related genes in bone metastases of prostate cancer
title_full Identification and validation of a novel overall survival prediction model for immune-related genes in bone metastases of prostate cancer
title_fullStr Identification and validation of a novel overall survival prediction model for immune-related genes in bone metastases of prostate cancer
title_full_unstemmed Identification and validation of a novel overall survival prediction model for immune-related genes in bone metastases of prostate cancer
title_short Identification and validation of a novel overall survival prediction model for immune-related genes in bone metastases of prostate cancer
title_sort identification and validation of a novel overall survival prediction model for immune-related genes in bone metastases of prostate cancer
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10415549/
https://www.ncbi.nlm.nih.gov/pubmed/37494663
http://dx.doi.org/10.18632/aging.204900
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