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Relationship between cancer stem cell-related SNPs and survival outcomes in patients with primary lung cancer

BACKGROUND: Cancer stem cells may be the source of cancer-causing mutant cells and are closely related to the prognosis of cancer. Our study aimed to investigate the potential association between single-nucleotide polymorphisms (SNPs) of cancer stem cell-related genes and the prognosis of lung cance...

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Autores principales: Xu, Xinying, Liu, Yuhang, Hu, Huiyi, Wang, Jinshen, Cai, Yuxin, Xie, Jun, Kang, Mingqiang, He, Fei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10416443/
https://www.ncbi.nlm.nih.gov/pubmed/37563730
http://dx.doi.org/10.1186/s12957-023-03064-z
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author Xu, Xinying
Liu, Yuhang
Hu, Huiyi
Wang, Jinshen
Cai, Yuxin
Xie, Jun
Kang, Mingqiang
He, Fei
author_facet Xu, Xinying
Liu, Yuhang
Hu, Huiyi
Wang, Jinshen
Cai, Yuxin
Xie, Jun
Kang, Mingqiang
He, Fei
author_sort Xu, Xinying
collection PubMed
description BACKGROUND: Cancer stem cells may be the source of cancer-causing mutant cells and are closely related to the prognosis of cancer. Our study aimed to investigate the potential association between single-nucleotide polymorphisms (SNPs) of cancer stem cell-related genes and the prognosis of lung cancer patients. METHODS: The SNP loci were genotyped by matrix-assisted laser desorption ionization time of flight mass spectrometry (MALDI-TOF–MS), and the overall survival of subjects was analyzed by log-rank test after stratifying and adjusting their demographic data, clinical data, and genotypes. The correlation between survival time and quality of life of lung cancer under codominant, dominant, recessive, and additive genetic models was analyzed by the Cox regression model. The association between SNP polymorphism and the prognosis of lung cancer was analyzed by Stata16.0 software, and their heterogeneity was tested. Interaction analysis was performed using R software (version 4.2.0). RESULTS: Stratified analysis unveiled that rs3740535 had recessive AA genotype and additive GG genotype; Rs3130932 dominant GT + GG genotype, additive TT genotype; Rs13409 additive TT genotype; Rs6815391 recessive CC genotype and additional TT genotype were associated with increased risk of lung cancer death. Rs3130932 recessive GG genotype was associated with a reduced risk of lung cancer death. CONCLUSION: Rs3740535, rs3130932, rs13409, and rs6815391 are associated with the overall survival of lung cancer patients and may be valuable for the prognosis of lung cancer patients. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12957-023-03064-z.
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spelling pubmed-104164432023-08-12 Relationship between cancer stem cell-related SNPs and survival outcomes in patients with primary lung cancer Xu, Xinying Liu, Yuhang Hu, Huiyi Wang, Jinshen Cai, Yuxin Xie, Jun Kang, Mingqiang He, Fei World J Surg Oncol Research BACKGROUND: Cancer stem cells may be the source of cancer-causing mutant cells and are closely related to the prognosis of cancer. Our study aimed to investigate the potential association between single-nucleotide polymorphisms (SNPs) of cancer stem cell-related genes and the prognosis of lung cancer patients. METHODS: The SNP loci were genotyped by matrix-assisted laser desorption ionization time of flight mass spectrometry (MALDI-TOF–MS), and the overall survival of subjects was analyzed by log-rank test after stratifying and adjusting their demographic data, clinical data, and genotypes. The correlation between survival time and quality of life of lung cancer under codominant, dominant, recessive, and additive genetic models was analyzed by the Cox regression model. The association between SNP polymorphism and the prognosis of lung cancer was analyzed by Stata16.0 software, and their heterogeneity was tested. Interaction analysis was performed using R software (version 4.2.0). RESULTS: Stratified analysis unveiled that rs3740535 had recessive AA genotype and additive GG genotype; Rs3130932 dominant GT + GG genotype, additive TT genotype; Rs13409 additive TT genotype; Rs6815391 recessive CC genotype and additional TT genotype were associated with increased risk of lung cancer death. Rs3130932 recessive GG genotype was associated with a reduced risk of lung cancer death. CONCLUSION: Rs3740535, rs3130932, rs13409, and rs6815391 are associated with the overall survival of lung cancer patients and may be valuable for the prognosis of lung cancer patients. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12957-023-03064-z. BioMed Central 2023-08-11 /pmc/articles/PMC10416443/ /pubmed/37563730 http://dx.doi.org/10.1186/s12957-023-03064-z Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Xu, Xinying
Liu, Yuhang
Hu, Huiyi
Wang, Jinshen
Cai, Yuxin
Xie, Jun
Kang, Mingqiang
He, Fei
Relationship between cancer stem cell-related SNPs and survival outcomes in patients with primary lung cancer
title Relationship between cancer stem cell-related SNPs and survival outcomes in patients with primary lung cancer
title_full Relationship between cancer stem cell-related SNPs and survival outcomes in patients with primary lung cancer
title_fullStr Relationship between cancer stem cell-related SNPs and survival outcomes in patients with primary lung cancer
title_full_unstemmed Relationship between cancer stem cell-related SNPs and survival outcomes in patients with primary lung cancer
title_short Relationship between cancer stem cell-related SNPs and survival outcomes in patients with primary lung cancer
title_sort relationship between cancer stem cell-related snps and survival outcomes in patients with primary lung cancer
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10416443/
https://www.ncbi.nlm.nih.gov/pubmed/37563730
http://dx.doi.org/10.1186/s12957-023-03064-z
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