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A comprehensive workflow and its validation for simulating diffuse speckle statistics for optical blood flow measurements

Diffuse optical methods including speckle contrast optical spectroscopy and tomography (SCOS and SCOT), use speckle contrast ([Formula: see text]) to measure deep blood flow. In order to design practical systems, parameters such as signal-to-noise ratio (SNR) and the effects of limited sampling of s...

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Autores principales: Frisk, Lisa Kobayashi, Verma, Manish, Bešlija, Faruk, Lin, Chen-Hao P., Patil, Nishighanda, Chetia, Sumana, Trobaugh, Jason, Culver, Joseph P., Durduran, Turgut
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10418286/
https://www.ncbi.nlm.nih.gov/pubmed/37577491
http://dx.doi.org/10.1101/2023.08.03.551830
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author Frisk, Lisa Kobayashi
Verma, Manish
Bešlija, Faruk
Lin, Chen-Hao P.
Patil, Nishighanda
Chetia, Sumana
Trobaugh, Jason
Culver, Joseph P.
Durduran, Turgut
author_facet Frisk, Lisa Kobayashi
Verma, Manish
Bešlija, Faruk
Lin, Chen-Hao P.
Patil, Nishighanda
Chetia, Sumana
Trobaugh, Jason
Culver, Joseph P.
Durduran, Turgut
author_sort Frisk, Lisa Kobayashi
collection PubMed
description Diffuse optical methods including speckle contrast optical spectroscopy and tomography (SCOS and SCOT), use speckle contrast ([Formula: see text]) to measure deep blood flow. In order to design practical systems, parameters such as signal-to-noise ratio (SNR) and the effects of limited sampling of statistical quantities, should be considered. To that end, we have developed a method for simulating speckle contrast signals including effects of detector noise. The method was validated experimentally, and the simulations were used to study the effects of physical and experimental parameters on the accuracy and precision of [Formula: see text]. These results revealed that systematic detector effects resulted in decreased accuracy and precision of [Formula: see text] in the regime of low detected signals. The method can provide guidelines for the design and usage of SCOS and/or SCOT instruments.
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spelling pubmed-104182862023-08-12 A comprehensive workflow and its validation for simulating diffuse speckle statistics for optical blood flow measurements Frisk, Lisa Kobayashi Verma, Manish Bešlija, Faruk Lin, Chen-Hao P. Patil, Nishighanda Chetia, Sumana Trobaugh, Jason Culver, Joseph P. Durduran, Turgut bioRxiv Article Diffuse optical methods including speckle contrast optical spectroscopy and tomography (SCOS and SCOT), use speckle contrast ([Formula: see text]) to measure deep blood flow. In order to design practical systems, parameters such as signal-to-noise ratio (SNR) and the effects of limited sampling of statistical quantities, should be considered. To that end, we have developed a method for simulating speckle contrast signals including effects of detector noise. The method was validated experimentally, and the simulations were used to study the effects of physical and experimental parameters on the accuracy and precision of [Formula: see text]. These results revealed that systematic detector effects resulted in decreased accuracy and precision of [Formula: see text] in the regime of low detected signals. The method can provide guidelines for the design and usage of SCOS and/or SCOT instruments. Cold Spring Harbor Laboratory 2023-08-04 /pmc/articles/PMC10418286/ /pubmed/37577491 http://dx.doi.org/10.1101/2023.08.03.551830 Text en https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0/) , which allows reusers to distribute, remix, adapt, and build upon the material in any medium or format, so long as attribution is given to the creator. The license allows for commercial use.
spellingShingle Article
Frisk, Lisa Kobayashi
Verma, Manish
Bešlija, Faruk
Lin, Chen-Hao P.
Patil, Nishighanda
Chetia, Sumana
Trobaugh, Jason
Culver, Joseph P.
Durduran, Turgut
A comprehensive workflow and its validation for simulating diffuse speckle statistics for optical blood flow measurements
title A comprehensive workflow and its validation for simulating diffuse speckle statistics for optical blood flow measurements
title_full A comprehensive workflow and its validation for simulating diffuse speckle statistics for optical blood flow measurements
title_fullStr A comprehensive workflow and its validation for simulating diffuse speckle statistics for optical blood flow measurements
title_full_unstemmed A comprehensive workflow and its validation for simulating diffuse speckle statistics for optical blood flow measurements
title_short A comprehensive workflow and its validation for simulating diffuse speckle statistics for optical blood flow measurements
title_sort comprehensive workflow and its validation for simulating diffuse speckle statistics for optical blood flow measurements
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10418286/
https://www.ncbi.nlm.nih.gov/pubmed/37577491
http://dx.doi.org/10.1101/2023.08.03.551830
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