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A comprehensive workflow and its validation for simulating diffuse speckle statistics for optical blood flow measurements
Diffuse optical methods including speckle contrast optical spectroscopy and tomography (SCOS and SCOT), use speckle contrast ([Formula: see text]) to measure deep blood flow. In order to design practical systems, parameters such as signal-to-noise ratio (SNR) and the effects of limited sampling of s...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Cold Spring Harbor Laboratory
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10418286/ https://www.ncbi.nlm.nih.gov/pubmed/37577491 http://dx.doi.org/10.1101/2023.08.03.551830 |
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author | Frisk, Lisa Kobayashi Verma, Manish Bešlija, Faruk Lin, Chen-Hao P. Patil, Nishighanda Chetia, Sumana Trobaugh, Jason Culver, Joseph P. Durduran, Turgut |
author_facet | Frisk, Lisa Kobayashi Verma, Manish Bešlija, Faruk Lin, Chen-Hao P. Patil, Nishighanda Chetia, Sumana Trobaugh, Jason Culver, Joseph P. Durduran, Turgut |
author_sort | Frisk, Lisa Kobayashi |
collection | PubMed |
description | Diffuse optical methods including speckle contrast optical spectroscopy and tomography (SCOS and SCOT), use speckle contrast ([Formula: see text]) to measure deep blood flow. In order to design practical systems, parameters such as signal-to-noise ratio (SNR) and the effects of limited sampling of statistical quantities, should be considered. To that end, we have developed a method for simulating speckle contrast signals including effects of detector noise. The method was validated experimentally, and the simulations were used to study the effects of physical and experimental parameters on the accuracy and precision of [Formula: see text]. These results revealed that systematic detector effects resulted in decreased accuracy and precision of [Formula: see text] in the regime of low detected signals. The method can provide guidelines for the design and usage of SCOS and/or SCOT instruments. |
format | Online Article Text |
id | pubmed-10418286 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Cold Spring Harbor Laboratory |
record_format | MEDLINE/PubMed |
spelling | pubmed-104182862023-08-12 A comprehensive workflow and its validation for simulating diffuse speckle statistics for optical blood flow measurements Frisk, Lisa Kobayashi Verma, Manish Bešlija, Faruk Lin, Chen-Hao P. Patil, Nishighanda Chetia, Sumana Trobaugh, Jason Culver, Joseph P. Durduran, Turgut bioRxiv Article Diffuse optical methods including speckle contrast optical spectroscopy and tomography (SCOS and SCOT), use speckle contrast ([Formula: see text]) to measure deep blood flow. In order to design practical systems, parameters such as signal-to-noise ratio (SNR) and the effects of limited sampling of statistical quantities, should be considered. To that end, we have developed a method for simulating speckle contrast signals including effects of detector noise. The method was validated experimentally, and the simulations were used to study the effects of physical and experimental parameters on the accuracy and precision of [Formula: see text]. These results revealed that systematic detector effects resulted in decreased accuracy and precision of [Formula: see text] in the regime of low detected signals. The method can provide guidelines for the design and usage of SCOS and/or SCOT instruments. Cold Spring Harbor Laboratory 2023-08-04 /pmc/articles/PMC10418286/ /pubmed/37577491 http://dx.doi.org/10.1101/2023.08.03.551830 Text en https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0/) , which allows reusers to distribute, remix, adapt, and build upon the material in any medium or format, so long as attribution is given to the creator. The license allows for commercial use. |
spellingShingle | Article Frisk, Lisa Kobayashi Verma, Manish Bešlija, Faruk Lin, Chen-Hao P. Patil, Nishighanda Chetia, Sumana Trobaugh, Jason Culver, Joseph P. Durduran, Turgut A comprehensive workflow and its validation for simulating diffuse speckle statistics for optical blood flow measurements |
title | A comprehensive workflow and its validation for simulating diffuse speckle statistics for optical blood flow measurements |
title_full | A comprehensive workflow and its validation for simulating diffuse speckle statistics for optical blood flow measurements |
title_fullStr | A comprehensive workflow and its validation for simulating diffuse speckle statistics for optical blood flow measurements |
title_full_unstemmed | A comprehensive workflow and its validation for simulating diffuse speckle statistics for optical blood flow measurements |
title_short | A comprehensive workflow and its validation for simulating diffuse speckle statistics for optical blood flow measurements |
title_sort | comprehensive workflow and its validation for simulating diffuse speckle statistics for optical blood flow measurements |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10418286/ https://www.ncbi.nlm.nih.gov/pubmed/37577491 http://dx.doi.org/10.1101/2023.08.03.551830 |
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