Cargando…

Genome-Wide Identification of the NF-Y Gene Family and Their Involvement in Bolting and Flowering in Flowering Chinese Cabbage

Flowering Chinese cabbage (Brassica campestris L. ssp. Chinensis var. utilis Tsen et Lee) is a widely consumed vegetable in southern China with significant economic value. Developing product organs in the flowering Chinese cabbage involves two key processes: bolting and flowering. Nuclear factor Y (...

Descripción completa

Detalles Bibliográficos
Autores principales: Jiang, Zhehao, Wang, Yuting, Li, Wenxiang, Wang, Yudan, Liu, Xiaojuan, Ou, Xi, Su, Wei, Song, Shiwei, Chen, Riyuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10418651/
https://www.ncbi.nlm.nih.gov/pubmed/37569274
http://dx.doi.org/10.3390/ijms241511898
_version_ 1785088315868839936
author Jiang, Zhehao
Wang, Yuting
Li, Wenxiang
Wang, Yudan
Liu, Xiaojuan
Ou, Xi
Su, Wei
Song, Shiwei
Chen, Riyuan
author_facet Jiang, Zhehao
Wang, Yuting
Li, Wenxiang
Wang, Yudan
Liu, Xiaojuan
Ou, Xi
Su, Wei
Song, Shiwei
Chen, Riyuan
author_sort Jiang, Zhehao
collection PubMed
description Flowering Chinese cabbage (Brassica campestris L. ssp. Chinensis var. utilis Tsen et Lee) is a widely consumed vegetable in southern China with significant economic value. Developing product organs in the flowering Chinese cabbage involves two key processes: bolting and flowering. Nuclear factor Y (NF-Y) is a heterotrimeric transcription factor known for its crucial role in various plant developmental processes. However, there is limited information available on the involvement of this gene family during flowering during Chinese cabbage development. In this study, 49 BcNF-Y genes were identified and characterized along with their physicochemical properties, gene structure, chromosomal location, collinearity, and expression patterns. We also conducted subcellular localization, yeast two-hybrid, and transcriptional activity assays on selected BcNF-Y genes. The findings of this study revealed enhanced expression levels of specific BcNF-Y genes during the stalk development and flowering stages in flowering Chinese cabbage. Notably, BcNF-YA8, BcNF-YB14, BcNF-YB20, and BcNF-YC5 interacted with BcRGA1, a negative regulator of GA signaling, indicating their potential involvement in GA-mediated stalk development. This study provides valuable insights into the role of BcNF-Y genes in flowering Chinese cabbage development and suggests that they are potential candidates for further investigating the key regulators of cabbage bolting and flowering.
format Online
Article
Text
id pubmed-10418651
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-104186512023-08-12 Genome-Wide Identification of the NF-Y Gene Family and Their Involvement in Bolting and Flowering in Flowering Chinese Cabbage Jiang, Zhehao Wang, Yuting Li, Wenxiang Wang, Yudan Liu, Xiaojuan Ou, Xi Su, Wei Song, Shiwei Chen, Riyuan Int J Mol Sci Article Flowering Chinese cabbage (Brassica campestris L. ssp. Chinensis var. utilis Tsen et Lee) is a widely consumed vegetable in southern China with significant economic value. Developing product organs in the flowering Chinese cabbage involves two key processes: bolting and flowering. Nuclear factor Y (NF-Y) is a heterotrimeric transcription factor known for its crucial role in various plant developmental processes. However, there is limited information available on the involvement of this gene family during flowering during Chinese cabbage development. In this study, 49 BcNF-Y genes were identified and characterized along with their physicochemical properties, gene structure, chromosomal location, collinearity, and expression patterns. We also conducted subcellular localization, yeast two-hybrid, and transcriptional activity assays on selected BcNF-Y genes. The findings of this study revealed enhanced expression levels of specific BcNF-Y genes during the stalk development and flowering stages in flowering Chinese cabbage. Notably, BcNF-YA8, BcNF-YB14, BcNF-YB20, and BcNF-YC5 interacted with BcRGA1, a negative regulator of GA signaling, indicating their potential involvement in GA-mediated stalk development. This study provides valuable insights into the role of BcNF-Y genes in flowering Chinese cabbage development and suggests that they are potential candidates for further investigating the key regulators of cabbage bolting and flowering. MDPI 2023-07-25 /pmc/articles/PMC10418651/ /pubmed/37569274 http://dx.doi.org/10.3390/ijms241511898 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Jiang, Zhehao
Wang, Yuting
Li, Wenxiang
Wang, Yudan
Liu, Xiaojuan
Ou, Xi
Su, Wei
Song, Shiwei
Chen, Riyuan
Genome-Wide Identification of the NF-Y Gene Family and Their Involvement in Bolting and Flowering in Flowering Chinese Cabbage
title Genome-Wide Identification of the NF-Y Gene Family and Their Involvement in Bolting and Flowering in Flowering Chinese Cabbage
title_full Genome-Wide Identification of the NF-Y Gene Family and Their Involvement in Bolting and Flowering in Flowering Chinese Cabbage
title_fullStr Genome-Wide Identification of the NF-Y Gene Family and Their Involvement in Bolting and Flowering in Flowering Chinese Cabbage
title_full_unstemmed Genome-Wide Identification of the NF-Y Gene Family and Their Involvement in Bolting and Flowering in Flowering Chinese Cabbage
title_short Genome-Wide Identification of the NF-Y Gene Family and Their Involvement in Bolting and Flowering in Flowering Chinese Cabbage
title_sort genome-wide identification of the nf-y gene family and their involvement in bolting and flowering in flowering chinese cabbage
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10418651/
https://www.ncbi.nlm.nih.gov/pubmed/37569274
http://dx.doi.org/10.3390/ijms241511898
work_keys_str_mv AT jiangzhehao genomewideidentificationofthenfygenefamilyandtheirinvolvementinboltingandfloweringinfloweringchinesecabbage
AT wangyuting genomewideidentificationofthenfygenefamilyandtheirinvolvementinboltingandfloweringinfloweringchinesecabbage
AT liwenxiang genomewideidentificationofthenfygenefamilyandtheirinvolvementinboltingandfloweringinfloweringchinesecabbage
AT wangyudan genomewideidentificationofthenfygenefamilyandtheirinvolvementinboltingandfloweringinfloweringchinesecabbage
AT liuxiaojuan genomewideidentificationofthenfygenefamilyandtheirinvolvementinboltingandfloweringinfloweringchinesecabbage
AT ouxi genomewideidentificationofthenfygenefamilyandtheirinvolvementinboltingandfloweringinfloweringchinesecabbage
AT suwei genomewideidentificationofthenfygenefamilyandtheirinvolvementinboltingandfloweringinfloweringchinesecabbage
AT songshiwei genomewideidentificationofthenfygenefamilyandtheirinvolvementinboltingandfloweringinfloweringchinesecabbage
AT chenriyuan genomewideidentificationofthenfygenefamilyandtheirinvolvementinboltingandfloweringinfloweringchinesecabbage