Cargando…
Genome-Wide Identification of the NF-Y Gene Family and Their Involvement in Bolting and Flowering in Flowering Chinese Cabbage
Flowering Chinese cabbage (Brassica campestris L. ssp. Chinensis var. utilis Tsen et Lee) is a widely consumed vegetable in southern China with significant economic value. Developing product organs in the flowering Chinese cabbage involves two key processes: bolting and flowering. Nuclear factor Y (...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10418651/ https://www.ncbi.nlm.nih.gov/pubmed/37569274 http://dx.doi.org/10.3390/ijms241511898 |
_version_ | 1785088315868839936 |
---|---|
author | Jiang, Zhehao Wang, Yuting Li, Wenxiang Wang, Yudan Liu, Xiaojuan Ou, Xi Su, Wei Song, Shiwei Chen, Riyuan |
author_facet | Jiang, Zhehao Wang, Yuting Li, Wenxiang Wang, Yudan Liu, Xiaojuan Ou, Xi Su, Wei Song, Shiwei Chen, Riyuan |
author_sort | Jiang, Zhehao |
collection | PubMed |
description | Flowering Chinese cabbage (Brassica campestris L. ssp. Chinensis var. utilis Tsen et Lee) is a widely consumed vegetable in southern China with significant economic value. Developing product organs in the flowering Chinese cabbage involves two key processes: bolting and flowering. Nuclear factor Y (NF-Y) is a heterotrimeric transcription factor known for its crucial role in various plant developmental processes. However, there is limited information available on the involvement of this gene family during flowering during Chinese cabbage development. In this study, 49 BcNF-Y genes were identified and characterized along with their physicochemical properties, gene structure, chromosomal location, collinearity, and expression patterns. We also conducted subcellular localization, yeast two-hybrid, and transcriptional activity assays on selected BcNF-Y genes. The findings of this study revealed enhanced expression levels of specific BcNF-Y genes during the stalk development and flowering stages in flowering Chinese cabbage. Notably, BcNF-YA8, BcNF-YB14, BcNF-YB20, and BcNF-YC5 interacted with BcRGA1, a negative regulator of GA signaling, indicating their potential involvement in GA-mediated stalk development. This study provides valuable insights into the role of BcNF-Y genes in flowering Chinese cabbage development and suggests that they are potential candidates for further investigating the key regulators of cabbage bolting and flowering. |
format | Online Article Text |
id | pubmed-10418651 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-104186512023-08-12 Genome-Wide Identification of the NF-Y Gene Family and Their Involvement in Bolting and Flowering in Flowering Chinese Cabbage Jiang, Zhehao Wang, Yuting Li, Wenxiang Wang, Yudan Liu, Xiaojuan Ou, Xi Su, Wei Song, Shiwei Chen, Riyuan Int J Mol Sci Article Flowering Chinese cabbage (Brassica campestris L. ssp. Chinensis var. utilis Tsen et Lee) is a widely consumed vegetable in southern China with significant economic value. Developing product organs in the flowering Chinese cabbage involves two key processes: bolting and flowering. Nuclear factor Y (NF-Y) is a heterotrimeric transcription factor known for its crucial role in various plant developmental processes. However, there is limited information available on the involvement of this gene family during flowering during Chinese cabbage development. In this study, 49 BcNF-Y genes were identified and characterized along with their physicochemical properties, gene structure, chromosomal location, collinearity, and expression patterns. We also conducted subcellular localization, yeast two-hybrid, and transcriptional activity assays on selected BcNF-Y genes. The findings of this study revealed enhanced expression levels of specific BcNF-Y genes during the stalk development and flowering stages in flowering Chinese cabbage. Notably, BcNF-YA8, BcNF-YB14, BcNF-YB20, and BcNF-YC5 interacted with BcRGA1, a negative regulator of GA signaling, indicating their potential involvement in GA-mediated stalk development. This study provides valuable insights into the role of BcNF-Y genes in flowering Chinese cabbage development and suggests that they are potential candidates for further investigating the key regulators of cabbage bolting and flowering. MDPI 2023-07-25 /pmc/articles/PMC10418651/ /pubmed/37569274 http://dx.doi.org/10.3390/ijms241511898 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Jiang, Zhehao Wang, Yuting Li, Wenxiang Wang, Yudan Liu, Xiaojuan Ou, Xi Su, Wei Song, Shiwei Chen, Riyuan Genome-Wide Identification of the NF-Y Gene Family and Their Involvement in Bolting and Flowering in Flowering Chinese Cabbage |
title | Genome-Wide Identification of the NF-Y Gene Family and Their Involvement in Bolting and Flowering in Flowering Chinese Cabbage |
title_full | Genome-Wide Identification of the NF-Y Gene Family and Their Involvement in Bolting and Flowering in Flowering Chinese Cabbage |
title_fullStr | Genome-Wide Identification of the NF-Y Gene Family and Their Involvement in Bolting and Flowering in Flowering Chinese Cabbage |
title_full_unstemmed | Genome-Wide Identification of the NF-Y Gene Family and Their Involvement in Bolting and Flowering in Flowering Chinese Cabbage |
title_short | Genome-Wide Identification of the NF-Y Gene Family and Their Involvement in Bolting and Flowering in Flowering Chinese Cabbage |
title_sort | genome-wide identification of the nf-y gene family and their involvement in bolting and flowering in flowering chinese cabbage |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10418651/ https://www.ncbi.nlm.nih.gov/pubmed/37569274 http://dx.doi.org/10.3390/ijms241511898 |
work_keys_str_mv | AT jiangzhehao genomewideidentificationofthenfygenefamilyandtheirinvolvementinboltingandfloweringinfloweringchinesecabbage AT wangyuting genomewideidentificationofthenfygenefamilyandtheirinvolvementinboltingandfloweringinfloweringchinesecabbage AT liwenxiang genomewideidentificationofthenfygenefamilyandtheirinvolvementinboltingandfloweringinfloweringchinesecabbage AT wangyudan genomewideidentificationofthenfygenefamilyandtheirinvolvementinboltingandfloweringinfloweringchinesecabbage AT liuxiaojuan genomewideidentificationofthenfygenefamilyandtheirinvolvementinboltingandfloweringinfloweringchinesecabbage AT ouxi genomewideidentificationofthenfygenefamilyandtheirinvolvementinboltingandfloweringinfloweringchinesecabbage AT suwei genomewideidentificationofthenfygenefamilyandtheirinvolvementinboltingandfloweringinfloweringchinesecabbage AT songshiwei genomewideidentificationofthenfygenefamilyandtheirinvolvementinboltingandfloweringinfloweringchinesecabbage AT chenriyuan genomewideidentificationofthenfygenefamilyandtheirinvolvementinboltingandfloweringinfloweringchinesecabbage |