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Whole-Exome and Transcriptome Sequencing Expands the Genotype of Majewski Osteodysplastic Primordial Dwarfism Type II

Microcephalic Osteodysplastic Primordial Dwarfism type II (MOPDII) represents the most common form of primordial dwarfism. MOPD clinical features include severe prenatal and postnatal growth retardation, postnatal severe microcephaly, hypotonia, and an increased risk for cerebrovascular disease and...

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Autores principales: Marzano, Flaviana, Chiara, Matteo, Consiglio, Arianna, D’Amato, Gabriele, Gentile, Mattia, Mirabelli, Valentina, Piane, Maria, Savio, Camilla, Fabiani, Marco, D’Elia, Domenica, Sbisà, Elisabetta, Scarano, Gioacchino, Lonardo, Fortunato, Tullo, Apollonia, Pesole, Graziano, Faienza, Maria Felicia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10418986/
https://www.ncbi.nlm.nih.gov/pubmed/37569667
http://dx.doi.org/10.3390/ijms241512291
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author Marzano, Flaviana
Chiara, Matteo
Consiglio, Arianna
D’Amato, Gabriele
Gentile, Mattia
Mirabelli, Valentina
Piane, Maria
Savio, Camilla
Fabiani, Marco
D’Elia, Domenica
Sbisà, Elisabetta
Scarano, Gioacchino
Lonardo, Fortunato
Tullo, Apollonia
Pesole, Graziano
Faienza, Maria Felicia
author_facet Marzano, Flaviana
Chiara, Matteo
Consiglio, Arianna
D’Amato, Gabriele
Gentile, Mattia
Mirabelli, Valentina
Piane, Maria
Savio, Camilla
Fabiani, Marco
D’Elia, Domenica
Sbisà, Elisabetta
Scarano, Gioacchino
Lonardo, Fortunato
Tullo, Apollonia
Pesole, Graziano
Faienza, Maria Felicia
author_sort Marzano, Flaviana
collection PubMed
description Microcephalic Osteodysplastic Primordial Dwarfism type II (MOPDII) represents the most common form of primordial dwarfism. MOPD clinical features include severe prenatal and postnatal growth retardation, postnatal severe microcephaly, hypotonia, and an increased risk for cerebrovascular disease and insulin resistance. Autosomal recessive biallelic loss-of-function genomic variants in the centrosomal pericentrin (PCNT) gene on chromosome 21q22 cause MOPDII. Over the past decade, exome sequencing (ES) and massive RNA sequencing have been effectively employed for both the discovery of novel disease genes and to expand the genotypes of well-known diseases. In this paper we report the results both the RNA sequencing and ES of three patients affected by MOPDII with the aim of exploring whether differentially expressed genes and previously uncharacterized gene variants, in addition to PCNT pathogenic variants, could be associated with the complex phenotype of this disease. We discovered a downregulation of key factors involved in growth, such as IGF1R, IGF2R, and RAF1, in all three investigated patients. Moreover, ES identified a shortlist of genes associated with deleterious, rare variants in MOPDII patients. Our results suggest that Next Generation Sequencing (NGS) technologies can be successfully applied for the molecular characterization of the complex genotypic background of MOPDII.
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spelling pubmed-104189862023-08-12 Whole-Exome and Transcriptome Sequencing Expands the Genotype of Majewski Osteodysplastic Primordial Dwarfism Type II Marzano, Flaviana Chiara, Matteo Consiglio, Arianna D’Amato, Gabriele Gentile, Mattia Mirabelli, Valentina Piane, Maria Savio, Camilla Fabiani, Marco D’Elia, Domenica Sbisà, Elisabetta Scarano, Gioacchino Lonardo, Fortunato Tullo, Apollonia Pesole, Graziano Faienza, Maria Felicia Int J Mol Sci Article Microcephalic Osteodysplastic Primordial Dwarfism type II (MOPDII) represents the most common form of primordial dwarfism. MOPD clinical features include severe prenatal and postnatal growth retardation, postnatal severe microcephaly, hypotonia, and an increased risk for cerebrovascular disease and insulin resistance. Autosomal recessive biallelic loss-of-function genomic variants in the centrosomal pericentrin (PCNT) gene on chromosome 21q22 cause MOPDII. Over the past decade, exome sequencing (ES) and massive RNA sequencing have been effectively employed for both the discovery of novel disease genes and to expand the genotypes of well-known diseases. In this paper we report the results both the RNA sequencing and ES of three patients affected by MOPDII with the aim of exploring whether differentially expressed genes and previously uncharacterized gene variants, in addition to PCNT pathogenic variants, could be associated with the complex phenotype of this disease. We discovered a downregulation of key factors involved in growth, such as IGF1R, IGF2R, and RAF1, in all three investigated patients. Moreover, ES identified a shortlist of genes associated with deleterious, rare variants in MOPDII patients. Our results suggest that Next Generation Sequencing (NGS) technologies can be successfully applied for the molecular characterization of the complex genotypic background of MOPDII. MDPI 2023-07-31 /pmc/articles/PMC10418986/ /pubmed/37569667 http://dx.doi.org/10.3390/ijms241512291 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Marzano, Flaviana
Chiara, Matteo
Consiglio, Arianna
D’Amato, Gabriele
Gentile, Mattia
Mirabelli, Valentina
Piane, Maria
Savio, Camilla
Fabiani, Marco
D’Elia, Domenica
Sbisà, Elisabetta
Scarano, Gioacchino
Lonardo, Fortunato
Tullo, Apollonia
Pesole, Graziano
Faienza, Maria Felicia
Whole-Exome and Transcriptome Sequencing Expands the Genotype of Majewski Osteodysplastic Primordial Dwarfism Type II
title Whole-Exome and Transcriptome Sequencing Expands the Genotype of Majewski Osteodysplastic Primordial Dwarfism Type II
title_full Whole-Exome and Transcriptome Sequencing Expands the Genotype of Majewski Osteodysplastic Primordial Dwarfism Type II
title_fullStr Whole-Exome and Transcriptome Sequencing Expands the Genotype of Majewski Osteodysplastic Primordial Dwarfism Type II
title_full_unstemmed Whole-Exome and Transcriptome Sequencing Expands the Genotype of Majewski Osteodysplastic Primordial Dwarfism Type II
title_short Whole-Exome and Transcriptome Sequencing Expands the Genotype of Majewski Osteodysplastic Primordial Dwarfism Type II
title_sort whole-exome and transcriptome sequencing expands the genotype of majewski osteodysplastic primordial dwarfism type ii
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10418986/
https://www.ncbi.nlm.nih.gov/pubmed/37569667
http://dx.doi.org/10.3390/ijms241512291
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