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Nanoparticle Tracking Analysis of Urinary Extracellular Vesicle Proteins as a New Challenge in Laboratory Medicine

Urinary extracellular vesicle (uEV) proteins may be used as specific markers of kidney damage in various pathophysiological conditions. The nanoparticle-tracking analysis (NTA) appears to be the most useful method for the analysis of uEVs due to its ability to analyze particles below 300 nm. The NTA...

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Autores principales: Sałaga-Zaleska, Kornelia, Kuchta, Agnieszka, Bzoma, Beata, Chyła-Danił, Gabriela, Safianowska, Anna, Płoska, Agata, Kalinowski, Leszek, Dębska-Ślizień, Alicja, Jankowski, Maciej
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10419144/
https://www.ncbi.nlm.nih.gov/pubmed/37569604
http://dx.doi.org/10.3390/ijms241512228
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author Sałaga-Zaleska, Kornelia
Kuchta, Agnieszka
Bzoma, Beata
Chyła-Danił, Gabriela
Safianowska, Anna
Płoska, Agata
Kalinowski, Leszek
Dębska-Ślizień, Alicja
Jankowski, Maciej
author_facet Sałaga-Zaleska, Kornelia
Kuchta, Agnieszka
Bzoma, Beata
Chyła-Danił, Gabriela
Safianowska, Anna
Płoska, Agata
Kalinowski, Leszek
Dębska-Ślizień, Alicja
Jankowski, Maciej
author_sort Sałaga-Zaleska, Kornelia
collection PubMed
description Urinary extracellular vesicle (uEV) proteins may be used as specific markers of kidney damage in various pathophysiological conditions. The nanoparticle-tracking analysis (NTA) appears to be the most useful method for the analysis of uEVs due to its ability to analyze particles below 300 nm. The NTA method has been used to measure the size and concentration of uEVs and also allows for a deeper analysis of uEVs based on their protein composition using fluorescence measurements. However, despite much interest in the clinical application of uEVs, their analysis using the NTA method is poorly described and requires meticulous sample preparation, experimental adjustment of instrument settings, and above all, an understanding of the limitations of the method. In the present work, we demonstrate the usefulness of an NTA. We also present problems encountered during analysis with possible solutions: the choice of sample dilution, the method of the presentation and comparison of results, photobleaching, and the adjustment of instrument settings for a specific analysis. We show that the NTA method appears to be a promising method for the determination of uEVs. However, it is important to be aware of potential problems that may affect the results.
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spelling pubmed-104191442023-08-12 Nanoparticle Tracking Analysis of Urinary Extracellular Vesicle Proteins as a New Challenge in Laboratory Medicine Sałaga-Zaleska, Kornelia Kuchta, Agnieszka Bzoma, Beata Chyła-Danił, Gabriela Safianowska, Anna Płoska, Agata Kalinowski, Leszek Dębska-Ślizień, Alicja Jankowski, Maciej Int J Mol Sci Article Urinary extracellular vesicle (uEV) proteins may be used as specific markers of kidney damage in various pathophysiological conditions. The nanoparticle-tracking analysis (NTA) appears to be the most useful method for the analysis of uEVs due to its ability to analyze particles below 300 nm. The NTA method has been used to measure the size and concentration of uEVs and also allows for a deeper analysis of uEVs based on their protein composition using fluorescence measurements. However, despite much interest in the clinical application of uEVs, their analysis using the NTA method is poorly described and requires meticulous sample preparation, experimental adjustment of instrument settings, and above all, an understanding of the limitations of the method. In the present work, we demonstrate the usefulness of an NTA. We also present problems encountered during analysis with possible solutions: the choice of sample dilution, the method of the presentation and comparison of results, photobleaching, and the adjustment of instrument settings for a specific analysis. We show that the NTA method appears to be a promising method for the determination of uEVs. However, it is important to be aware of potential problems that may affect the results. MDPI 2023-07-31 /pmc/articles/PMC10419144/ /pubmed/37569604 http://dx.doi.org/10.3390/ijms241512228 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Sałaga-Zaleska, Kornelia
Kuchta, Agnieszka
Bzoma, Beata
Chyła-Danił, Gabriela
Safianowska, Anna
Płoska, Agata
Kalinowski, Leszek
Dębska-Ślizień, Alicja
Jankowski, Maciej
Nanoparticle Tracking Analysis of Urinary Extracellular Vesicle Proteins as a New Challenge in Laboratory Medicine
title Nanoparticle Tracking Analysis of Urinary Extracellular Vesicle Proteins as a New Challenge in Laboratory Medicine
title_full Nanoparticle Tracking Analysis of Urinary Extracellular Vesicle Proteins as a New Challenge in Laboratory Medicine
title_fullStr Nanoparticle Tracking Analysis of Urinary Extracellular Vesicle Proteins as a New Challenge in Laboratory Medicine
title_full_unstemmed Nanoparticle Tracking Analysis of Urinary Extracellular Vesicle Proteins as a New Challenge in Laboratory Medicine
title_short Nanoparticle Tracking Analysis of Urinary Extracellular Vesicle Proteins as a New Challenge in Laboratory Medicine
title_sort nanoparticle tracking analysis of urinary extracellular vesicle proteins as a new challenge in laboratory medicine
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10419144/
https://www.ncbi.nlm.nih.gov/pubmed/37569604
http://dx.doi.org/10.3390/ijms241512228
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