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EDIL3 is a potential prognostic biomarker that correlates with immune infiltrates in gastric cancer

BACKGROUND: EDIL3, which contains epidermal growth factor-like repeats and discoidin I-like domains, is a secretory protein that plays an important role in embryonic development and various illnesses. However, the biological function of EDIL3 in gastric cancer (GC) is still unclear. The objective of...

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Autores principales: Ke, Bin, Liang, Zheng-Kai, Li, Bin, Wang, Xue-Jun, Liu, Ning, Liang, Han, Zhang, Ru-Peng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10422953/
https://www.ncbi.nlm.nih.gov/pubmed/37576496
http://dx.doi.org/10.7717/peerj.15559
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author Ke, Bin
Liang, Zheng-Kai
Li, Bin
Wang, Xue-Jun
Liu, Ning
Liang, Han
Zhang, Ru-Peng
author_facet Ke, Bin
Liang, Zheng-Kai
Li, Bin
Wang, Xue-Jun
Liu, Ning
Liang, Han
Zhang, Ru-Peng
author_sort Ke, Bin
collection PubMed
description BACKGROUND: EDIL3, which contains epidermal growth factor-like repeats and discoidin I-like domains, is a secretory protein that plays an important role in embryonic development and various illnesses. However, the biological function of EDIL3 in gastric cancer (GC) is still unclear. The objective of this research was to explore the role and potential mechanism of EDIL3 in GC. METHODS: In this study, we used the GEPIA, HPA, MethSurv, SMART, STRING, GeneMANIA, LinkedOmics TIMER, TIMER2.0, TISIDB, and RNAactDrug databases to comprehensively analyze the roles of EDIL3 in GC. To validate the in silico findings, EDIL3 expression was measured in our collected GC tissues. Meanwhile, several in vitro experiments were performed to test the function of EDIL3 in GC. RESULTS: We found that EDIL3 was highly expressed in GC and associated with adverse clinical features. In vitro assays revealed that EDIL3 promoted the proliferation, migration, and invasion of GC cells. The functions of EDIL3 and co-expression genes were significantly associated with extracellular structure organization and matrix receptor interaction. EDIL3 expression was positively associated with numerous tumor-infiltrating immune cells and their biomarkers. CONCLUSION: This study determined that EDIL3 may function as an oncogene and is associated with immune infiltration in GC. EDIL3 could be used as a potential therapeutic target for GC.
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spelling pubmed-104229532023-08-13 EDIL3 is a potential prognostic biomarker that correlates with immune infiltrates in gastric cancer Ke, Bin Liang, Zheng-Kai Li, Bin Wang, Xue-Jun Liu, Ning Liang, Han Zhang, Ru-Peng PeerJ Bioinformatics BACKGROUND: EDIL3, which contains epidermal growth factor-like repeats and discoidin I-like domains, is a secretory protein that plays an important role in embryonic development and various illnesses. However, the biological function of EDIL3 in gastric cancer (GC) is still unclear. The objective of this research was to explore the role and potential mechanism of EDIL3 in GC. METHODS: In this study, we used the GEPIA, HPA, MethSurv, SMART, STRING, GeneMANIA, LinkedOmics TIMER, TIMER2.0, TISIDB, and RNAactDrug databases to comprehensively analyze the roles of EDIL3 in GC. To validate the in silico findings, EDIL3 expression was measured in our collected GC tissues. Meanwhile, several in vitro experiments were performed to test the function of EDIL3 in GC. RESULTS: We found that EDIL3 was highly expressed in GC and associated with adverse clinical features. In vitro assays revealed that EDIL3 promoted the proliferation, migration, and invasion of GC cells. The functions of EDIL3 and co-expression genes were significantly associated with extracellular structure organization and matrix receptor interaction. EDIL3 expression was positively associated with numerous tumor-infiltrating immune cells and their biomarkers. CONCLUSION: This study determined that EDIL3 may function as an oncogene and is associated with immune infiltration in GC. EDIL3 could be used as a potential therapeutic target for GC. PeerJ Inc. 2023-08-09 /pmc/articles/PMC10422953/ /pubmed/37576496 http://dx.doi.org/10.7717/peerj.15559 Text en ©2023 Ke et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Bioinformatics
Ke, Bin
Liang, Zheng-Kai
Li, Bin
Wang, Xue-Jun
Liu, Ning
Liang, Han
Zhang, Ru-Peng
EDIL3 is a potential prognostic biomarker that correlates with immune infiltrates in gastric cancer
title EDIL3 is a potential prognostic biomarker that correlates with immune infiltrates in gastric cancer
title_full EDIL3 is a potential prognostic biomarker that correlates with immune infiltrates in gastric cancer
title_fullStr EDIL3 is a potential prognostic biomarker that correlates with immune infiltrates in gastric cancer
title_full_unstemmed EDIL3 is a potential prognostic biomarker that correlates with immune infiltrates in gastric cancer
title_short EDIL3 is a potential prognostic biomarker that correlates with immune infiltrates in gastric cancer
title_sort edil3 is a potential prognostic biomarker that correlates with immune infiltrates in gastric cancer
topic Bioinformatics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10422953/
https://www.ncbi.nlm.nih.gov/pubmed/37576496
http://dx.doi.org/10.7717/peerj.15559
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