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Computing the Multicover Bifiltration

Given a finite set [Formula: see text] , let [Formula: see text] denote the set of all points within distance r to at least k points of A. Allowing r and k to vary, we obtain a 2-parameter family of spaces that grow larger when r increases or k decreases, called the multicover bifiltration. Motivate...

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Autores principales: Corbet, René, Kerber, Michael, Lesnick, Michael, Osang, Georg
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10423148/
https://www.ncbi.nlm.nih.gov/pubmed/37581017
http://dx.doi.org/10.1007/s00454-022-00476-8
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author Corbet, René
Kerber, Michael
Lesnick, Michael
Osang, Georg
author_facet Corbet, René
Kerber, Michael
Lesnick, Michael
Osang, Georg
author_sort Corbet, René
collection PubMed
description Given a finite set [Formula: see text] , let [Formula: see text] denote the set of all points within distance r to at least k points of A. Allowing r and k to vary, we obtain a 2-parameter family of spaces that grow larger when r increases or k decreases, called the multicover bifiltration. Motivated by the problem of computing the homology of this bifiltration, we introduce two closely related combinatorial bifiltrations, one polyhedral and the other simplicial, which are both topologically equivalent to the multicover bifiltration and far smaller than a Čech-based model considered in prior work of Sheehy. Our polyhedral construction is a bifiltration of the rhomboid tiling of Edelsbrunner and Osang, and can be efficiently computed using a variant of an algorithm given by these authors. Using an implementation for dimension 2 and 3, we provide experimental results. Our simplicial construction is useful for understanding the polyhedral construction and proving its correctness.
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spelling pubmed-104231482023-08-14 Computing the Multicover Bifiltration Corbet, René Kerber, Michael Lesnick, Michael Osang, Georg Discrete Comput Geom Article Given a finite set [Formula: see text] , let [Formula: see text] denote the set of all points within distance r to at least k points of A. Allowing r and k to vary, we obtain a 2-parameter family of spaces that grow larger when r increases or k decreases, called the multicover bifiltration. Motivated by the problem of computing the homology of this bifiltration, we introduce two closely related combinatorial bifiltrations, one polyhedral and the other simplicial, which are both topologically equivalent to the multicover bifiltration and far smaller than a Čech-based model considered in prior work of Sheehy. Our polyhedral construction is a bifiltration of the rhomboid tiling of Edelsbrunner and Osang, and can be efficiently computed using a variant of an algorithm given by these authors. Using an implementation for dimension 2 and 3, we provide experimental results. Our simplicial construction is useful for understanding the polyhedral construction and proving its correctness. Springer US 2023-02-20 2023 /pmc/articles/PMC10423148/ /pubmed/37581017 http://dx.doi.org/10.1007/s00454-022-00476-8 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Corbet, René
Kerber, Michael
Lesnick, Michael
Osang, Georg
Computing the Multicover Bifiltration
title Computing the Multicover Bifiltration
title_full Computing the Multicover Bifiltration
title_fullStr Computing the Multicover Bifiltration
title_full_unstemmed Computing the Multicover Bifiltration
title_short Computing the Multicover Bifiltration
title_sort computing the multicover bifiltration
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10423148/
https://www.ncbi.nlm.nih.gov/pubmed/37581017
http://dx.doi.org/10.1007/s00454-022-00476-8
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