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Sequence variations of phase-separating proteins and resources for studying biomolecular condensates: Resources for studying biomolecular condensates

Phase separation (PS) is an important mechanism underlying the formation of biomolecular condensates. Physiological condensates are associated with numerous biological processes, such as transcription, immunity, signaling, and synaptic transmission. Changes in particular amino acids or segments can...

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Detalles Bibliográficos
Autores principales: Guo, Gaigai, Wang, Xinxin, Zhang, Yi, Li, Tingting
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10423696/
https://www.ncbi.nlm.nih.gov/pubmed/37464880
http://dx.doi.org/10.3724/abbs.2023131
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author Guo, Gaigai
Wang, Xinxin
Zhang, Yi
Li, Tingting
author_facet Guo, Gaigai
Wang, Xinxin
Zhang, Yi
Li, Tingting
author_sort Guo, Gaigai
collection PubMed
description Phase separation (PS) is an important mechanism underlying the formation of biomolecular condensates. Physiological condensates are associated with numerous biological processes, such as transcription, immunity, signaling, and synaptic transmission. Changes in particular amino acids or segments can disturb the protein’s phase behavior and interactions with other biomolecules in condensates. It is thus presumed that variations in the phase-separating-prone domains can significantly impact the properties and functions of condensates. The dysfunction of condensates contributes to a number of pathological processes. Pharmacological perturbation of these condensates is proposed as a promising way to restore physiological states. In this review, we characterize the variations observed in PS proteins that lead to aberrant biomolecular compartmentalization. We also showcase recent advancements in bioinformatics of membraneless organelles (MLOs), focusing on available databases useful for screening PS proteins and describing endogenous condensates, guiding researchers to seek the underlying pathogenic mechanisms of biomolecular condensates.
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spelling pubmed-104236962023-08-15 Sequence variations of phase-separating proteins and resources for studying biomolecular condensates: Resources for studying biomolecular condensates Guo, Gaigai Wang, Xinxin Zhang, Yi Li, Tingting Acta Biochim Biophys Sin (Shanghai) Research Article Phase separation (PS) is an important mechanism underlying the formation of biomolecular condensates. Physiological condensates are associated with numerous biological processes, such as transcription, immunity, signaling, and synaptic transmission. Changes in particular amino acids or segments can disturb the protein’s phase behavior and interactions with other biomolecules in condensates. It is thus presumed that variations in the phase-separating-prone domains can significantly impact the properties and functions of condensates. The dysfunction of condensates contributes to a number of pathological processes. Pharmacological perturbation of these condensates is proposed as a promising way to restore physiological states. In this review, we characterize the variations observed in PS proteins that lead to aberrant biomolecular compartmentalization. We also showcase recent advancements in bioinformatics of membraneless organelles (MLOs), focusing on available databases useful for screening PS proteins and describing endogenous condensates, guiding researchers to seek the underlying pathogenic mechanisms of biomolecular condensates. Oxford University Press 2023-07-18 /pmc/articles/PMC10423696/ /pubmed/37464880 http://dx.doi.org/10.3724/abbs.2023131 Text en © The Author(s) 2021. 0 https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Research Article
Guo, Gaigai
Wang, Xinxin
Zhang, Yi
Li, Tingting
Sequence variations of phase-separating proteins and resources for studying biomolecular condensates: Resources for studying biomolecular condensates
title Sequence variations of phase-separating proteins and resources for studying biomolecular condensates: Resources for studying biomolecular condensates
title_full Sequence variations of phase-separating proteins and resources for studying biomolecular condensates: Resources for studying biomolecular condensates
title_fullStr Sequence variations of phase-separating proteins and resources for studying biomolecular condensates: Resources for studying biomolecular condensates
title_full_unstemmed Sequence variations of phase-separating proteins and resources for studying biomolecular condensates: Resources for studying biomolecular condensates
title_short Sequence variations of phase-separating proteins and resources for studying biomolecular condensates: Resources for studying biomolecular condensates
title_sort sequence variations of phase-separating proteins and resources for studying biomolecular condensates: resources for studying biomolecular condensates
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10423696/
https://www.ncbi.nlm.nih.gov/pubmed/37464880
http://dx.doi.org/10.3724/abbs.2023131
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