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Image denoising in acoustic microscopy using block-matching and 4D filter
Scanning acoustic microscopy (SAM) is a label-free imaging technique used in biomedical imaging, non-destructive testing, and material research to visualize surface and sub-surface structures. In ultrasonic imaging, noises in images can reduce contrast, edge and texture details, and resolution, nega...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10425453/ https://www.ncbi.nlm.nih.gov/pubmed/37580411 http://dx.doi.org/10.1038/s41598-023-40301-7 |
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author | Gupta, Shubham Kumar Pal, Rishant Ahmad, Azeem Melandsø, Frank Habib, Anowarul |
author_facet | Gupta, Shubham Kumar Pal, Rishant Ahmad, Azeem Melandsø, Frank Habib, Anowarul |
author_sort | Gupta, Shubham Kumar |
collection | PubMed |
description | Scanning acoustic microscopy (SAM) is a label-free imaging technique used in biomedical imaging, non-destructive testing, and material research to visualize surface and sub-surface structures. In ultrasonic imaging, noises in images can reduce contrast, edge and texture details, and resolution, negatively impacting post-processing algorithms. To reduce the noises in the scanned image, we have employed a 4D block-matching (BM4D) filter that can be used to denoise acoustic volumetric signals. BM4D filter utilizes the transform domain filtering technique with hard thresholding and Wiener filtering stages. The proposed algorithm produces the most suitable denoised output compared to other conventional filtering methods (Gaussian filter, median filter, and Wiener filter) when applied to noisy images. The output from the BM4D-filtered images was compared to the noise level with different conventional filters. Filtered images were qualitatively analyzed using metrics such as structural similarity index matrix (SSIM) and peak signal-to-noise ratio (PSNR). The combined qualitative and quantitative analysis demonstrates that the BM4D technique is the most suitable method for denoising acoustic imaging from the SAM. The proposed block matching filter opens a new avenue in the field of acoustic or photoacoustic image denoising, particularly in scenarios with poor signal-to-noise ratios. |
format | Online Article Text |
id | pubmed-10425453 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-104254532023-08-16 Image denoising in acoustic microscopy using block-matching and 4D filter Gupta, Shubham Kumar Pal, Rishant Ahmad, Azeem Melandsø, Frank Habib, Anowarul Sci Rep Article Scanning acoustic microscopy (SAM) is a label-free imaging technique used in biomedical imaging, non-destructive testing, and material research to visualize surface and sub-surface structures. In ultrasonic imaging, noises in images can reduce contrast, edge and texture details, and resolution, negatively impacting post-processing algorithms. To reduce the noises in the scanned image, we have employed a 4D block-matching (BM4D) filter that can be used to denoise acoustic volumetric signals. BM4D filter utilizes the transform domain filtering technique with hard thresholding and Wiener filtering stages. The proposed algorithm produces the most suitable denoised output compared to other conventional filtering methods (Gaussian filter, median filter, and Wiener filter) when applied to noisy images. The output from the BM4D-filtered images was compared to the noise level with different conventional filters. Filtered images were qualitatively analyzed using metrics such as structural similarity index matrix (SSIM) and peak signal-to-noise ratio (PSNR). The combined qualitative and quantitative analysis demonstrates that the BM4D technique is the most suitable method for denoising acoustic imaging from the SAM. The proposed block matching filter opens a new avenue in the field of acoustic or photoacoustic image denoising, particularly in scenarios with poor signal-to-noise ratios. Nature Publishing Group UK 2023-08-14 /pmc/articles/PMC10425453/ /pubmed/37580411 http://dx.doi.org/10.1038/s41598-023-40301-7 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Gupta, Shubham Kumar Pal, Rishant Ahmad, Azeem Melandsø, Frank Habib, Anowarul Image denoising in acoustic microscopy using block-matching and 4D filter |
title | Image denoising in acoustic microscopy using block-matching and 4D filter |
title_full | Image denoising in acoustic microscopy using block-matching and 4D filter |
title_fullStr | Image denoising in acoustic microscopy using block-matching and 4D filter |
title_full_unstemmed | Image denoising in acoustic microscopy using block-matching and 4D filter |
title_short | Image denoising in acoustic microscopy using block-matching and 4D filter |
title_sort | image denoising in acoustic microscopy using block-matching and 4d filter |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10425453/ https://www.ncbi.nlm.nih.gov/pubmed/37580411 http://dx.doi.org/10.1038/s41598-023-40301-7 |
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