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Image denoising in acoustic microscopy using block-matching and 4D filter

Scanning acoustic microscopy (SAM) is a label-free imaging technique used in biomedical imaging, non-destructive testing, and material research to visualize surface and sub-surface structures. In ultrasonic imaging, noises in images can reduce contrast, edge and texture details, and resolution, nega...

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Autores principales: Gupta, Shubham Kumar, Pal, Rishant, Ahmad, Azeem, Melandsø, Frank, Habib, Anowarul
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10425453/
https://www.ncbi.nlm.nih.gov/pubmed/37580411
http://dx.doi.org/10.1038/s41598-023-40301-7
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author Gupta, Shubham Kumar
Pal, Rishant
Ahmad, Azeem
Melandsø, Frank
Habib, Anowarul
author_facet Gupta, Shubham Kumar
Pal, Rishant
Ahmad, Azeem
Melandsø, Frank
Habib, Anowarul
author_sort Gupta, Shubham Kumar
collection PubMed
description Scanning acoustic microscopy (SAM) is a label-free imaging technique used in biomedical imaging, non-destructive testing, and material research to visualize surface and sub-surface structures. In ultrasonic imaging, noises in images can reduce contrast, edge and texture details, and resolution, negatively impacting post-processing algorithms. To reduce the noises in the scanned image, we have employed a 4D block-matching (BM4D) filter that can be used to denoise acoustic volumetric signals. BM4D filter utilizes the transform domain filtering technique with hard thresholding and Wiener filtering stages. The proposed algorithm produces the most suitable denoised output compared to other conventional filtering methods (Gaussian filter, median filter, and Wiener filter) when applied to noisy images. The output from the BM4D-filtered images was compared to the noise level with different conventional filters. Filtered images were qualitatively analyzed using metrics such as structural similarity index matrix (SSIM) and peak signal-to-noise ratio (PSNR). The combined qualitative and quantitative analysis demonstrates that the BM4D technique is the most suitable method for denoising acoustic imaging from the SAM. The proposed block matching filter opens a new avenue in the field of acoustic or photoacoustic image denoising, particularly in scenarios with poor signal-to-noise ratios.
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spelling pubmed-104254532023-08-16 Image denoising in acoustic microscopy using block-matching and 4D filter Gupta, Shubham Kumar Pal, Rishant Ahmad, Azeem Melandsø, Frank Habib, Anowarul Sci Rep Article Scanning acoustic microscopy (SAM) is a label-free imaging technique used in biomedical imaging, non-destructive testing, and material research to visualize surface and sub-surface structures. In ultrasonic imaging, noises in images can reduce contrast, edge and texture details, and resolution, negatively impacting post-processing algorithms. To reduce the noises in the scanned image, we have employed a 4D block-matching (BM4D) filter that can be used to denoise acoustic volumetric signals. BM4D filter utilizes the transform domain filtering technique with hard thresholding and Wiener filtering stages. The proposed algorithm produces the most suitable denoised output compared to other conventional filtering methods (Gaussian filter, median filter, and Wiener filter) when applied to noisy images. The output from the BM4D-filtered images was compared to the noise level with different conventional filters. Filtered images were qualitatively analyzed using metrics such as structural similarity index matrix (SSIM) and peak signal-to-noise ratio (PSNR). The combined qualitative and quantitative analysis demonstrates that the BM4D technique is the most suitable method for denoising acoustic imaging from the SAM. The proposed block matching filter opens a new avenue in the field of acoustic or photoacoustic image denoising, particularly in scenarios with poor signal-to-noise ratios. Nature Publishing Group UK 2023-08-14 /pmc/articles/PMC10425453/ /pubmed/37580411 http://dx.doi.org/10.1038/s41598-023-40301-7 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Gupta, Shubham Kumar
Pal, Rishant
Ahmad, Azeem
Melandsø, Frank
Habib, Anowarul
Image denoising in acoustic microscopy using block-matching and 4D filter
title Image denoising in acoustic microscopy using block-matching and 4D filter
title_full Image denoising in acoustic microscopy using block-matching and 4D filter
title_fullStr Image denoising in acoustic microscopy using block-matching and 4D filter
title_full_unstemmed Image denoising in acoustic microscopy using block-matching and 4D filter
title_short Image denoising in acoustic microscopy using block-matching and 4D filter
title_sort image denoising in acoustic microscopy using block-matching and 4d filter
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10425453/
https://www.ncbi.nlm.nih.gov/pubmed/37580411
http://dx.doi.org/10.1038/s41598-023-40301-7
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