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Computational and theoretical chemistry of newly synthesized and characterized 2,2(’)-(5,5(’)-(1,4-phenylene)bis(1H-tetrazole-5,1-diyl))bis-N-acetamides
Energetic heterocycles, including pyridines, triazoles, and tetrazoles, exhibit greater density, heats of formation, and oxygen balance compared to their carbocyclic counterparts, making them a promising approach for synthesizing novel bis-tetrazole acetamides. Synthesized compounds A-F, some of whi...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10426183/ https://www.ncbi.nlm.nih.gov/pubmed/37580804 http://dx.doi.org/10.1186/s13065-023-01011-3 |
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author | Ejaz, Syeda Abida Farid, Aftab Zargar, Seema Channar, Pervaiz Ali Aziz, Mubashir Wani, Tanveer A. Attaullah, Hafiz Muhammad Ujhan, Rabail Tehzeeb, Arfa Saeed, Aamer Ali, Hafiz Saqib Erben, Mauricio F. |
author_facet | Ejaz, Syeda Abida Farid, Aftab Zargar, Seema Channar, Pervaiz Ali Aziz, Mubashir Wani, Tanveer A. Attaullah, Hafiz Muhammad Ujhan, Rabail Tehzeeb, Arfa Saeed, Aamer Ali, Hafiz Saqib Erben, Mauricio F. |
author_sort | Ejaz, Syeda Abida |
collection | PubMed |
description | Energetic heterocycles, including pyridines, triazoles, and tetrazoles, exhibit greater density, heats of formation, and oxygen balance compared to their carbocyclic counterparts, making them a promising approach for synthesizing novel bis-tetrazole acetamides. Synthesized compounds A-F, some of which feature a chlorine atom attached to the phenyl ring, serve as valuable synthons for aryl coupling reactions. Analysis via (1)H-NMR and (13)C-NMR spectroscopy, as well as density functional considerations through B3LYP functional correlation with 6-311 + + G(d) and 6-31G(d) basis set, revealed the observed LUMO/HOMO energies and charge transfer within the molecule. Additionally, the dipole moment, chemical hardness, softness, ionization potential, local reactivity potential via Fukui indices and thermodynamic properties (entropy, enthalpy, and Gibbs free energy) of the molecule were calculated through density functional theory studies. In addition, Molecular Docking studies were conducted to investigate the anti-cancer potential of synthesized heterocyclic compounds against caspase 3, NF-KAPPA-B and P53 protein. Molecular docking analysis demonstrated a potent interaction between 2,2’-(5,5’-(1,4-phenylene)bis(1H-tetrazole-5,1-diyl))bis-N-(2,4-dinitrophenyl) acetamides (6d) and TP53 and NF-KAPPA-B with binding energies of − 11.8 kJ/mol and − 10.9 kJ/mol for TP53 and NF-KAPPA-B, respectively. Similarly, 2,2’-(5,5’–(1,4-phenylene)bis(1H-tetrazole-5,1-diyl))bis-N-(2-chlorophenyl) acetamides (6f) exhibited a strong interaction with caspase-3 with binding energy of -10.0 kJ/mol, indicating their potential as therapeutic agents against these proteins. Furthermore, the findings of current study was further strengthen by 100 ns molecular dynamics (MD) simulations. Finally, theoretical studies of oxygen balance and nitrogen percentage suggest that these molecules can be utilized as energetic materials. GRAPHICAL ABSTRACT: [Image: see text] SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13065-023-01011-3. |
format | Online Article Text |
id | pubmed-10426183 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-104261832023-08-16 Computational and theoretical chemistry of newly synthesized and characterized 2,2(’)-(5,5(’)-(1,4-phenylene)bis(1H-tetrazole-5,1-diyl))bis-N-acetamides Ejaz, Syeda Abida Farid, Aftab Zargar, Seema Channar, Pervaiz Ali Aziz, Mubashir Wani, Tanveer A. Attaullah, Hafiz Muhammad Ujhan, Rabail Tehzeeb, Arfa Saeed, Aamer Ali, Hafiz Saqib Erben, Mauricio F. BMC Chem Research Energetic heterocycles, including pyridines, triazoles, and tetrazoles, exhibit greater density, heats of formation, and oxygen balance compared to their carbocyclic counterparts, making them a promising approach for synthesizing novel bis-tetrazole acetamides. Synthesized compounds A-F, some of which feature a chlorine atom attached to the phenyl ring, serve as valuable synthons for aryl coupling reactions. Analysis via (1)H-NMR and (13)C-NMR spectroscopy, as well as density functional considerations through B3LYP functional correlation with 6-311 + + G(d) and 6-31G(d) basis set, revealed the observed LUMO/HOMO energies and charge transfer within the molecule. Additionally, the dipole moment, chemical hardness, softness, ionization potential, local reactivity potential via Fukui indices and thermodynamic properties (entropy, enthalpy, and Gibbs free energy) of the molecule were calculated through density functional theory studies. In addition, Molecular Docking studies were conducted to investigate the anti-cancer potential of synthesized heterocyclic compounds against caspase 3, NF-KAPPA-B and P53 protein. Molecular docking analysis demonstrated a potent interaction between 2,2’-(5,5’-(1,4-phenylene)bis(1H-tetrazole-5,1-diyl))bis-N-(2,4-dinitrophenyl) acetamides (6d) and TP53 and NF-KAPPA-B with binding energies of − 11.8 kJ/mol and − 10.9 kJ/mol for TP53 and NF-KAPPA-B, respectively. Similarly, 2,2’-(5,5’–(1,4-phenylene)bis(1H-tetrazole-5,1-diyl))bis-N-(2-chlorophenyl) acetamides (6f) exhibited a strong interaction with caspase-3 with binding energy of -10.0 kJ/mol, indicating their potential as therapeutic agents against these proteins. Furthermore, the findings of current study was further strengthen by 100 ns molecular dynamics (MD) simulations. Finally, theoretical studies of oxygen balance and nitrogen percentage suggest that these molecules can be utilized as energetic materials. GRAPHICAL ABSTRACT: [Image: see text] SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13065-023-01011-3. Springer International Publishing 2023-08-14 /pmc/articles/PMC10426183/ /pubmed/37580804 http://dx.doi.org/10.1186/s13065-023-01011-3 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Ejaz, Syeda Abida Farid, Aftab Zargar, Seema Channar, Pervaiz Ali Aziz, Mubashir Wani, Tanveer A. Attaullah, Hafiz Muhammad Ujhan, Rabail Tehzeeb, Arfa Saeed, Aamer Ali, Hafiz Saqib Erben, Mauricio F. Computational and theoretical chemistry of newly synthesized and characterized 2,2(’)-(5,5(’)-(1,4-phenylene)bis(1H-tetrazole-5,1-diyl))bis-N-acetamides |
title | Computational and theoretical chemistry of newly synthesized and characterized 2,2(’)-(5,5(’)-(1,4-phenylene)bis(1H-tetrazole-5,1-diyl))bis-N-acetamides |
title_full | Computational and theoretical chemistry of newly synthesized and characterized 2,2(’)-(5,5(’)-(1,4-phenylene)bis(1H-tetrazole-5,1-diyl))bis-N-acetamides |
title_fullStr | Computational and theoretical chemistry of newly synthesized and characterized 2,2(’)-(5,5(’)-(1,4-phenylene)bis(1H-tetrazole-5,1-diyl))bis-N-acetamides |
title_full_unstemmed | Computational and theoretical chemistry of newly synthesized and characterized 2,2(’)-(5,5(’)-(1,4-phenylene)bis(1H-tetrazole-5,1-diyl))bis-N-acetamides |
title_short | Computational and theoretical chemistry of newly synthesized and characterized 2,2(’)-(5,5(’)-(1,4-phenylene)bis(1H-tetrazole-5,1-diyl))bis-N-acetamides |
title_sort | computational and theoretical chemistry of newly synthesized and characterized 2,2(’)-(5,5(’)-(1,4-phenylene)bis(1h-tetrazole-5,1-diyl))bis-n-acetamides |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10426183/ https://www.ncbi.nlm.nih.gov/pubmed/37580804 http://dx.doi.org/10.1186/s13065-023-01011-3 |
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