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A robust radiomic-based machine learning approach to detect cardiac amyloidosis using cardiac computed tomography

INTRODUCTION: Cardiac amyloidosis (CA) shares similar clinical and imaging characteristics (e.g., hypertrophic phenotype) with aortic stenosis (AS), but its prognosis is generally worse than severe AS alone. Recent studies suggest that the presence of CA is frequent (1 out of 8 patients) in patients...

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Autores principales: Lo Iacono, Francesca, Maragna, Riccardo, Pontone, Gianluca, Corino, Valentina D. A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10426499/
https://www.ncbi.nlm.nih.gov/pubmed/37588665
http://dx.doi.org/10.3389/fradi.2023.1193046
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author Lo Iacono, Francesca
Maragna, Riccardo
Pontone, Gianluca
Corino, Valentina D. A.
author_facet Lo Iacono, Francesca
Maragna, Riccardo
Pontone, Gianluca
Corino, Valentina D. A.
author_sort Lo Iacono, Francesca
collection PubMed
description INTRODUCTION: Cardiac amyloidosis (CA) shares similar clinical and imaging characteristics (e.g., hypertrophic phenotype) with aortic stenosis (AS), but its prognosis is generally worse than severe AS alone. Recent studies suggest that the presence of CA is frequent (1 out of 8 patients) in patients with severe AS. The coexistence of the two diseases complicates the prognosis and therapeutic management of both conditions. Thus, there is an urgent need to standardize and optimize the diagnostic process of CA and AS. The aim of this study is to develop a robust and reliable radiomics-based pipeline to differentiate the two pathologies. METHODS: Thirty patients were included in the study, equally divided between CA and AS. For each patient, a cardiac computed tomography (CCT) was analyzed by extracting 107 radiomics features from the LV wall. Feature robustness was evaluated by means of geometrical transformations to the ROIs and intra-class correlation coefficient (ICC) computation. Various correlation thresholds (0.80, 0.85, 0.90, 0.95, 1), feature selection methods [p-value, least absolute shrinkage and selection operator (LASSO), semi-supervised LASSO, principal component analysis (PCA), semi-supervised PCA, sequential forwards selection] and machine learning classifiers (k-nearest neighbors, support vector machine, decision tree, logistic regression and gradient boosting) were assessed using a leave-one-out cross-validation. Data augmentation was performed using the synthetic minority oversampling technique. Finally, explainability analysis was performed by using the SHapley Additive exPlanations (SHAP) method. RESULTS: Ninety-two radiomic features were selected as robust and used in the further steps. Best performances of classification were obtained using a correlation threshold of 0.95, PCA (keeping 95% of the variance, corresponding to 9 PCs) and support vector machine classifier reaching an accuracy, sensitivity and specificity of 0.93. Four PCs were found to be mainly dependent on textural features, two on first-order statistics and three on shape and size features. CONCLUSION: These preliminary results show that radiomics might be used as non-invasive tool able to differentiate CA from AS using clinical routine available images.
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spelling pubmed-104264992023-08-16 A robust radiomic-based machine learning approach to detect cardiac amyloidosis using cardiac computed tomography Lo Iacono, Francesca Maragna, Riccardo Pontone, Gianluca Corino, Valentina D. A. Front Radiol Radiology INTRODUCTION: Cardiac amyloidosis (CA) shares similar clinical and imaging characteristics (e.g., hypertrophic phenotype) with aortic stenosis (AS), but its prognosis is generally worse than severe AS alone. Recent studies suggest that the presence of CA is frequent (1 out of 8 patients) in patients with severe AS. The coexistence of the two diseases complicates the prognosis and therapeutic management of both conditions. Thus, there is an urgent need to standardize and optimize the diagnostic process of CA and AS. The aim of this study is to develop a robust and reliable radiomics-based pipeline to differentiate the two pathologies. METHODS: Thirty patients were included in the study, equally divided between CA and AS. For each patient, a cardiac computed tomography (CCT) was analyzed by extracting 107 radiomics features from the LV wall. Feature robustness was evaluated by means of geometrical transformations to the ROIs and intra-class correlation coefficient (ICC) computation. Various correlation thresholds (0.80, 0.85, 0.90, 0.95, 1), feature selection methods [p-value, least absolute shrinkage and selection operator (LASSO), semi-supervised LASSO, principal component analysis (PCA), semi-supervised PCA, sequential forwards selection] and machine learning classifiers (k-nearest neighbors, support vector machine, decision tree, logistic regression and gradient boosting) were assessed using a leave-one-out cross-validation. Data augmentation was performed using the synthetic minority oversampling technique. Finally, explainability analysis was performed by using the SHapley Additive exPlanations (SHAP) method. RESULTS: Ninety-two radiomic features were selected as robust and used in the further steps. Best performances of classification were obtained using a correlation threshold of 0.95, PCA (keeping 95% of the variance, corresponding to 9 PCs) and support vector machine classifier reaching an accuracy, sensitivity and specificity of 0.93. Four PCs were found to be mainly dependent on textural features, two on first-order statistics and three on shape and size features. CONCLUSION: These preliminary results show that radiomics might be used as non-invasive tool able to differentiate CA from AS using clinical routine available images. Frontiers Media S.A. 2023-06-16 /pmc/articles/PMC10426499/ /pubmed/37588665 http://dx.doi.org/10.3389/fradi.2023.1193046 Text en © 2023 Lo Iacono, Maragna, Pontone and Corino. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY) (https://creativecommons.org/licenses/by/4.0/) . The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Radiology
Lo Iacono, Francesca
Maragna, Riccardo
Pontone, Gianluca
Corino, Valentina D. A.
A robust radiomic-based machine learning approach to detect cardiac amyloidosis using cardiac computed tomography
title A robust radiomic-based machine learning approach to detect cardiac amyloidosis using cardiac computed tomography
title_full A robust radiomic-based machine learning approach to detect cardiac amyloidosis using cardiac computed tomography
title_fullStr A robust radiomic-based machine learning approach to detect cardiac amyloidosis using cardiac computed tomography
title_full_unstemmed A robust radiomic-based machine learning approach to detect cardiac amyloidosis using cardiac computed tomography
title_short A robust radiomic-based machine learning approach to detect cardiac amyloidosis using cardiac computed tomography
title_sort robust radiomic-based machine learning approach to detect cardiac amyloidosis using cardiac computed tomography
topic Radiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10426499/
https://www.ncbi.nlm.nih.gov/pubmed/37588665
http://dx.doi.org/10.3389/fradi.2023.1193046
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