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Quantification of Surface Tension Effects and Nucleation‐and‐Growth Rates during Self‐Assembly of Biological Condensates

Liquid‐solid and liquid‐liquid phase separation (PS) drives the formation of functional and disease‐associated biological assemblies. Principles of phase equilibrium are here employed to derive a general kinetic solution that predicts the evolution of the mass and size of biological assemblies. Ther...

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Autores principales: Sárkány, Zsuzsa, Rocha, Fernando, Bratek‐Skicki, Anna, Tompa, Peter, Macedo‐Ribeiro, Sandra, Martins, Pedro M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10427409/
https://www.ncbi.nlm.nih.gov/pubmed/37279376
http://dx.doi.org/10.1002/advs.202301501
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author Sárkány, Zsuzsa
Rocha, Fernando
Bratek‐Skicki, Anna
Tompa, Peter
Macedo‐Ribeiro, Sandra
Martins, Pedro M.
author_facet Sárkány, Zsuzsa
Rocha, Fernando
Bratek‐Skicki, Anna
Tompa, Peter
Macedo‐Ribeiro, Sandra
Martins, Pedro M.
author_sort Sárkány, Zsuzsa
collection PubMed
description Liquid‐solid and liquid‐liquid phase separation (PS) drives the formation of functional and disease‐associated biological assemblies. Principles of phase equilibrium are here employed to derive a general kinetic solution that predicts the evolution of the mass and size of biological assemblies. Thermodynamically, protein PS is determined by two measurable concentration limits: the saturation concentration and the critical solubility. Due to surface tension effects, the critical solubility can be higher than the saturation concentration for small, curved nuclei. Kinetically, PS is characterized by the primary nucleation rate constant and a combined rate constant accounting for growth and secondary nucleation. It is demonstrated that the formation of a limited number of large condensates is possible without active mechanisms of size control and in the absence of coalescence phenomena. The exact analytical solution can be used to interrogate how the elementary steps of PS are affected by candidate drugs.
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spelling pubmed-104274092023-08-17 Quantification of Surface Tension Effects and Nucleation‐and‐Growth Rates during Self‐Assembly of Biological Condensates Sárkány, Zsuzsa Rocha, Fernando Bratek‐Skicki, Anna Tompa, Peter Macedo‐Ribeiro, Sandra Martins, Pedro M. Adv Sci (Weinh) Research Articles Liquid‐solid and liquid‐liquid phase separation (PS) drives the formation of functional and disease‐associated biological assemblies. Principles of phase equilibrium are here employed to derive a general kinetic solution that predicts the evolution of the mass and size of biological assemblies. Thermodynamically, protein PS is determined by two measurable concentration limits: the saturation concentration and the critical solubility. Due to surface tension effects, the critical solubility can be higher than the saturation concentration for small, curved nuclei. Kinetically, PS is characterized by the primary nucleation rate constant and a combined rate constant accounting for growth and secondary nucleation. It is demonstrated that the formation of a limited number of large condensates is possible without active mechanisms of size control and in the absence of coalescence phenomena. The exact analytical solution can be used to interrogate how the elementary steps of PS are affected by candidate drugs. John Wiley and Sons Inc. 2023-06-06 /pmc/articles/PMC10427409/ /pubmed/37279376 http://dx.doi.org/10.1002/advs.202301501 Text en © 2023 The Authors. Advanced Science published by Wiley‐VCH GmbH https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Sárkány, Zsuzsa
Rocha, Fernando
Bratek‐Skicki, Anna
Tompa, Peter
Macedo‐Ribeiro, Sandra
Martins, Pedro M.
Quantification of Surface Tension Effects and Nucleation‐and‐Growth Rates during Self‐Assembly of Biological Condensates
title Quantification of Surface Tension Effects and Nucleation‐and‐Growth Rates during Self‐Assembly of Biological Condensates
title_full Quantification of Surface Tension Effects and Nucleation‐and‐Growth Rates during Self‐Assembly of Biological Condensates
title_fullStr Quantification of Surface Tension Effects and Nucleation‐and‐Growth Rates during Self‐Assembly of Biological Condensates
title_full_unstemmed Quantification of Surface Tension Effects and Nucleation‐and‐Growth Rates during Self‐Assembly of Biological Condensates
title_short Quantification of Surface Tension Effects and Nucleation‐and‐Growth Rates during Self‐Assembly of Biological Condensates
title_sort quantification of surface tension effects and nucleation‐and‐growth rates during self‐assembly of biological condensates
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10427409/
https://www.ncbi.nlm.nih.gov/pubmed/37279376
http://dx.doi.org/10.1002/advs.202301501
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