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Heterologous Expression and Biochemical Characterization of a New Chloroperoxidase Isolated from the Deep-Sea Hydrothermal Vent Black Yeast Hortaea werneckii UBOCC-A-208029
The initiation of this study relies on a targeted genome-mining approach to highlight the presence of a putative vanadium-dependent haloperoxidase-encoding gene in the deep-sea hydrothermal vent fungus Hortaea werneckii UBOCC-A-208029. To date, only three fungal vanadium-dependent haloperoxidases ha...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer US
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10427571/ https://www.ncbi.nlm.nih.gov/pubmed/37354383 http://dx.doi.org/10.1007/s10126-023-10222-7 |
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author | Cochereau, Bastien Le Strat, Yoran Ji, Qiaolin Pawtowski, Audrey Delage, Ludovic Weill, Amélie Mazéas, Lisa Hervé, Cécile Burgaud, Gaëtan Gunde-Cimerman, Nina Pouchus, Yves François Demont-Caulet, Nathalie Roullier, Catherine Meslet-Cladiere, Laurence |
author_facet | Cochereau, Bastien Le Strat, Yoran Ji, Qiaolin Pawtowski, Audrey Delage, Ludovic Weill, Amélie Mazéas, Lisa Hervé, Cécile Burgaud, Gaëtan Gunde-Cimerman, Nina Pouchus, Yves François Demont-Caulet, Nathalie Roullier, Catherine Meslet-Cladiere, Laurence |
author_sort | Cochereau, Bastien |
collection | PubMed |
description | The initiation of this study relies on a targeted genome-mining approach to highlight the presence of a putative vanadium-dependent haloperoxidase-encoding gene in the deep-sea hydrothermal vent fungus Hortaea werneckii UBOCC-A-208029. To date, only three fungal vanadium-dependent haloperoxidases have been described, one from the terrestrial species Curvularia inaequalis, one from the fungal plant pathogen Botrytis cinerea, and one from a marine derived isolate identified as Alternaria didymospora. In this study, we describe a new vanadium chloroperoxidase from the black yeast H. werneckii, successfully cloned and overexpressed in a bacterial host, which possesses higher affinity for bromide (K(m) = 26 µM) than chloride (K(m) = 237 mM). The enzyme was biochemically characterized, and we have evaluated its potential for biocatalysis by determining its stability and tolerance in organic solvents. We also describe its potential three-dimensional structure by building a model using the AlphaFold 2 artificial intelligence tool. This model shows some conservation of the 3D structure of the active site compared to the vanadium chloroperoxidase from C. inaequalis but it also highlights some differences in the active site entrance and the volume of the active site pocket, underlining its originality. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s10126-023-10222-7. |
format | Online Article Text |
id | pubmed-10427571 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Springer US |
record_format | MEDLINE/PubMed |
spelling | pubmed-104275712023-08-17 Heterologous Expression and Biochemical Characterization of a New Chloroperoxidase Isolated from the Deep-Sea Hydrothermal Vent Black Yeast Hortaea werneckii UBOCC-A-208029 Cochereau, Bastien Le Strat, Yoran Ji, Qiaolin Pawtowski, Audrey Delage, Ludovic Weill, Amélie Mazéas, Lisa Hervé, Cécile Burgaud, Gaëtan Gunde-Cimerman, Nina Pouchus, Yves François Demont-Caulet, Nathalie Roullier, Catherine Meslet-Cladiere, Laurence Mar Biotechnol (NY) Research The initiation of this study relies on a targeted genome-mining approach to highlight the presence of a putative vanadium-dependent haloperoxidase-encoding gene in the deep-sea hydrothermal vent fungus Hortaea werneckii UBOCC-A-208029. To date, only three fungal vanadium-dependent haloperoxidases have been described, one from the terrestrial species Curvularia inaequalis, one from the fungal plant pathogen Botrytis cinerea, and one from a marine derived isolate identified as Alternaria didymospora. In this study, we describe a new vanadium chloroperoxidase from the black yeast H. werneckii, successfully cloned and overexpressed in a bacterial host, which possesses higher affinity for bromide (K(m) = 26 µM) than chloride (K(m) = 237 mM). The enzyme was biochemically characterized, and we have evaluated its potential for biocatalysis by determining its stability and tolerance in organic solvents. We also describe its potential three-dimensional structure by building a model using the AlphaFold 2 artificial intelligence tool. This model shows some conservation of the 3D structure of the active site compared to the vanadium chloroperoxidase from C. inaequalis but it also highlights some differences in the active site entrance and the volume of the active site pocket, underlining its originality. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s10126-023-10222-7. Springer US 2023-06-24 2023 /pmc/articles/PMC10427571/ /pubmed/37354383 http://dx.doi.org/10.1007/s10126-023-10222-7 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Research Cochereau, Bastien Le Strat, Yoran Ji, Qiaolin Pawtowski, Audrey Delage, Ludovic Weill, Amélie Mazéas, Lisa Hervé, Cécile Burgaud, Gaëtan Gunde-Cimerman, Nina Pouchus, Yves François Demont-Caulet, Nathalie Roullier, Catherine Meslet-Cladiere, Laurence Heterologous Expression and Biochemical Characterization of a New Chloroperoxidase Isolated from the Deep-Sea Hydrothermal Vent Black Yeast Hortaea werneckii UBOCC-A-208029 |
title | Heterologous Expression and Biochemical Characterization of a New Chloroperoxidase Isolated from the Deep-Sea Hydrothermal Vent Black Yeast Hortaea werneckii UBOCC-A-208029 |
title_full | Heterologous Expression and Biochemical Characterization of a New Chloroperoxidase Isolated from the Deep-Sea Hydrothermal Vent Black Yeast Hortaea werneckii UBOCC-A-208029 |
title_fullStr | Heterologous Expression and Biochemical Characterization of a New Chloroperoxidase Isolated from the Deep-Sea Hydrothermal Vent Black Yeast Hortaea werneckii UBOCC-A-208029 |
title_full_unstemmed | Heterologous Expression and Biochemical Characterization of a New Chloroperoxidase Isolated from the Deep-Sea Hydrothermal Vent Black Yeast Hortaea werneckii UBOCC-A-208029 |
title_short | Heterologous Expression and Biochemical Characterization of a New Chloroperoxidase Isolated from the Deep-Sea Hydrothermal Vent Black Yeast Hortaea werneckii UBOCC-A-208029 |
title_sort | heterologous expression and biochemical characterization of a new chloroperoxidase isolated from the deep-sea hydrothermal vent black yeast hortaea werneckii ubocc-a-208029 |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10427571/ https://www.ncbi.nlm.nih.gov/pubmed/37354383 http://dx.doi.org/10.1007/s10126-023-10222-7 |
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