Cargando…

Establishment and characterization of a new class of adenylate cyclases (class VII ACs) in plants

Adenylate cyclase is the key enzyme in the synthesis of cAMP. Now, more and more plant genes which possessing AC function are being identified, but the classification of plant ACs has not yet been systematically studied and the relationship of plant ACs with other existing six classes ACs in animals...

Descripción completa

Detalles Bibliográficos
Autores principales: Liu, Zhiguo, Yuan, Ye, Wang, Lixin, Cao, Haonan, Wang, Chenyu, Zhao, Xuan, Wang, Lili, Liu, Mengjun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10427991/
https://www.ncbi.nlm.nih.gov/pubmed/37593644
http://dx.doi.org/10.1016/j.heliyon.2023.e18612
_version_ 1785090367095308288
author Liu, Zhiguo
Yuan, Ye
Wang, Lixin
Cao, Haonan
Wang, Chenyu
Zhao, Xuan
Wang, Lili
Liu, Mengjun
author_facet Liu, Zhiguo
Yuan, Ye
Wang, Lixin
Cao, Haonan
Wang, Chenyu
Zhao, Xuan
Wang, Lili
Liu, Mengjun
author_sort Liu, Zhiguo
collection PubMed
description Adenylate cyclase is the key enzyme in the synthesis of cAMP. Now, more and more plant genes which possessing AC function are being identified, but the classification of plant ACs has not yet been systematically studied and the relationship of plant ACs with other existing six classes ACs in animals and microorganisms is still unclear. In this study, we found that 7 of the 15 reported plant ACs with conserved CYTH-like_AC_Ⅳ-like domain were clustered into a group with high confidence (Group Ⅳ), while the other plant ACs were clustered into other three groups with no common domain. In addition, we also found that the Group Ⅳ plant ACs were grouped into an independent and specific class (Class VII), separated from the existing six classes of ACs. The Group Ⅳ plant ACs, compared to the existing six classes of ACs, own unique CYTH-like_AC_Ⅳ-like conserved domain and EXEXK signature motif, characteristic protein tertiary structures, specific subcellular localization and catalytic conditions. In view of the above, we regarded the Group Ⅳ plant ACs as the seventh class of AC (VII AC). This study does the systematic classification of plant ACs which could lay a foundation for further identification and study of the biological functions of the plant-specific VII ACs.
format Online
Article
Text
id pubmed-10427991
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-104279912023-08-17 Establishment and characterization of a new class of adenylate cyclases (class VII ACs) in plants Liu, Zhiguo Yuan, Ye Wang, Lixin Cao, Haonan Wang, Chenyu Zhao, Xuan Wang, Lili Liu, Mengjun Heliyon Research Article Adenylate cyclase is the key enzyme in the synthesis of cAMP. Now, more and more plant genes which possessing AC function are being identified, but the classification of plant ACs has not yet been systematically studied and the relationship of plant ACs with other existing six classes ACs in animals and microorganisms is still unclear. In this study, we found that 7 of the 15 reported plant ACs with conserved CYTH-like_AC_Ⅳ-like domain were clustered into a group with high confidence (Group Ⅳ), while the other plant ACs were clustered into other three groups with no common domain. In addition, we also found that the Group Ⅳ plant ACs were grouped into an independent and specific class (Class VII), separated from the existing six classes of ACs. The Group Ⅳ plant ACs, compared to the existing six classes of ACs, own unique CYTH-like_AC_Ⅳ-like conserved domain and EXEXK signature motif, characteristic protein tertiary structures, specific subcellular localization and catalytic conditions. In view of the above, we regarded the Group Ⅳ plant ACs as the seventh class of AC (VII AC). This study does the systematic classification of plant ACs which could lay a foundation for further identification and study of the biological functions of the plant-specific VII ACs. Elsevier 2023-08-02 /pmc/articles/PMC10427991/ /pubmed/37593644 http://dx.doi.org/10.1016/j.heliyon.2023.e18612 Text en © 2023 The Authors. Published by Elsevier Ltd. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research Article
Liu, Zhiguo
Yuan, Ye
Wang, Lixin
Cao, Haonan
Wang, Chenyu
Zhao, Xuan
Wang, Lili
Liu, Mengjun
Establishment and characterization of a new class of adenylate cyclases (class VII ACs) in plants
title Establishment and characterization of a new class of adenylate cyclases (class VII ACs) in plants
title_full Establishment and characterization of a new class of adenylate cyclases (class VII ACs) in plants
title_fullStr Establishment and characterization of a new class of adenylate cyclases (class VII ACs) in plants
title_full_unstemmed Establishment and characterization of a new class of adenylate cyclases (class VII ACs) in plants
title_short Establishment and characterization of a new class of adenylate cyclases (class VII ACs) in plants
title_sort establishment and characterization of a new class of adenylate cyclases (class vii acs) in plants
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10427991/
https://www.ncbi.nlm.nih.gov/pubmed/37593644
http://dx.doi.org/10.1016/j.heliyon.2023.e18612
work_keys_str_mv AT liuzhiguo establishmentandcharacterizationofanewclassofadenylatecyclasesclassviiacsinplants
AT yuanye establishmentandcharacterizationofanewclassofadenylatecyclasesclassviiacsinplants
AT wanglixin establishmentandcharacterizationofanewclassofadenylatecyclasesclassviiacsinplants
AT caohaonan establishmentandcharacterizationofanewclassofadenylatecyclasesclassviiacsinplants
AT wangchenyu establishmentandcharacterizationofanewclassofadenylatecyclasesclassviiacsinplants
AT zhaoxuan establishmentandcharacterizationofanewclassofadenylatecyclasesclassviiacsinplants
AT wanglili establishmentandcharacterizationofanewclassofadenylatecyclasesclassviiacsinplants
AT liumengjun establishmentandcharacterizationofanewclassofadenylatecyclasesclassviiacsinplants