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Dataset from RNAseq analysis of bud differentiation in Ficus carica

The presented data regards the transcriptome profiling and differential analysis with RNA-Seq approach with the following goals: de novo transcriptome assembly and genome annotation of Ficus carica and the differential expression analysis of parthenocarpic and non-partenocarpic varieties in order to...

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Autores principales: Marcotuli, Ilaria, Giove, Stefania Lucia, Giancaspro, Angelica, Gadaleta, Agata, Ferrara, Giuseppe
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10430147/
https://www.ncbi.nlm.nih.gov/pubmed/37593183
http://dx.doi.org/10.1016/j.dib.2023.109418
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author Marcotuli, Ilaria
Giove, Stefania Lucia
Giancaspro, Angelica
Gadaleta, Agata
Ferrara, Giuseppe
author_facet Marcotuli, Ilaria
Giove, Stefania Lucia
Giancaspro, Angelica
Gadaleta, Agata
Ferrara, Giuseppe
author_sort Marcotuli, Ilaria
collection PubMed
description The presented data regards the transcriptome profiling and differential analysis with RNA-Seq approach with the following goals: de novo transcriptome assembly and genome annotation of Ficus carica and the differential expression analysis of parthenocarpic and non-partenocarpic varieties in order to identify candidate genes for the production of seedless fig. Two fig varieties Dottato and Petrelli and the caprifig were grown at the fig repository at the ‘P. Martucci’ experimental station in Valenzano (Bari) of University of Bari ‘Aldo Moro’. The data included: RNA-seq data obtained from fruits of parthenocarpic and non-parthenocarpic varieties, gene expression in the different genetic materials; genes up and down regulated. The data in this article support information presented in the research article “I. Marcotuli, A. Mazzeo, P. Colasuonno, R. Terzano, D. Nigro, C. Porfido, A. Tarantino, R. Aiese Cigliano, W. Sanseverino, A. Gadaleta, G. Ferrara, Fruit Development in Ficus carica L.: Morphological and Genetic Approaches to Fig Buds for an Evolution From Monoecy Toward Dioecy. Front. Plant Sci.(2020) 11:1208. doi: 10.3389/fpls.2020.01208
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spelling pubmed-104301472023-08-17 Dataset from RNAseq analysis of bud differentiation in Ficus carica Marcotuli, Ilaria Giove, Stefania Lucia Giancaspro, Angelica Gadaleta, Agata Ferrara, Giuseppe Data Brief Data Article The presented data regards the transcriptome profiling and differential analysis with RNA-Seq approach with the following goals: de novo transcriptome assembly and genome annotation of Ficus carica and the differential expression analysis of parthenocarpic and non-partenocarpic varieties in order to identify candidate genes for the production of seedless fig. Two fig varieties Dottato and Petrelli and the caprifig were grown at the fig repository at the ‘P. Martucci’ experimental station in Valenzano (Bari) of University of Bari ‘Aldo Moro’. The data included: RNA-seq data obtained from fruits of parthenocarpic and non-parthenocarpic varieties, gene expression in the different genetic materials; genes up and down regulated. The data in this article support information presented in the research article “I. Marcotuli, A. Mazzeo, P. Colasuonno, R. Terzano, D. Nigro, C. Porfido, A. Tarantino, R. Aiese Cigliano, W. Sanseverino, A. Gadaleta, G. Ferrara, Fruit Development in Ficus carica L.: Morphological and Genetic Approaches to Fig Buds for an Evolution From Monoecy Toward Dioecy. Front. Plant Sci.(2020) 11:1208. doi: 10.3389/fpls.2020.01208 Elsevier 2023-07-29 /pmc/articles/PMC10430147/ /pubmed/37593183 http://dx.doi.org/10.1016/j.dib.2023.109418 Text en https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Marcotuli, Ilaria
Giove, Stefania Lucia
Giancaspro, Angelica
Gadaleta, Agata
Ferrara, Giuseppe
Dataset from RNAseq analysis of bud differentiation in Ficus carica
title Dataset from RNAseq analysis of bud differentiation in Ficus carica
title_full Dataset from RNAseq analysis of bud differentiation in Ficus carica
title_fullStr Dataset from RNAseq analysis of bud differentiation in Ficus carica
title_full_unstemmed Dataset from RNAseq analysis of bud differentiation in Ficus carica
title_short Dataset from RNAseq analysis of bud differentiation in Ficus carica
title_sort dataset from rnaseq analysis of bud differentiation in ficus carica
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10430147/
https://www.ncbi.nlm.nih.gov/pubmed/37593183
http://dx.doi.org/10.1016/j.dib.2023.109418
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