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Abundant, diverse, unknown: Extreme species richness and turnover despite drastic undersampling in two closely placed tropical Malaise traps
Arthropods account for a large proportion of animal biomass and diversity in terrestrial systems, making them crucial organisms in our environments. However, still too little is known about the highly abundant and megadiverse groups that often make up the bulk of collected samples, especially in the...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10431641/ https://www.ncbi.nlm.nih.gov/pubmed/37585425 http://dx.doi.org/10.1371/journal.pone.0290173 |
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author | Chimeno, Caroline Schmidt, Stefan Cancian de Araujo, Bruno Perez, Kate von Rintelen, Thomas Schmidt, Olga Hamid, Hasmiandy Pramesa Narakusumo, Raden Balke, Michael |
author_facet | Chimeno, Caroline Schmidt, Stefan Cancian de Araujo, Bruno Perez, Kate von Rintelen, Thomas Schmidt, Olga Hamid, Hasmiandy Pramesa Narakusumo, Raden Balke, Michael |
author_sort | Chimeno, Caroline |
collection | PubMed |
description | Arthropods account for a large proportion of animal biomass and diversity in terrestrial systems, making them crucial organisms in our environments. However, still too little is known about the highly abundant and megadiverse groups that often make up the bulk of collected samples, especially in the tropics. With molecular identification techniques ever more evolving, analysis of arthropod communities has accelerated. In our study, which was conducted within the Global Malaise trap Program (GMP) framework, we operated two closely placed Malaise traps in Padang, Sumatra, for three months. We analyzed the samples by DNA barcoding and sequenced a total of more than 70,000 insect specimens. For sequence clustering, we applied three different delimitation techniques, namely RESL, ASAP, and SpeciesIdentifier, which gave similar results. Despite our (very) limited sampling in time and space, our efforts recovered more than 10,000 BINs, of which the majority are associated with “dark taxa”. Further analysis indicates a drastic undersampling of both sampling sites, meaning that the true arthropod diversity at our sampling sites is even higher. Regardless of the close proximity of both Malaise traps (< 360 m), we discovered significantly distinct communities. |
format | Online Article Text |
id | pubmed-10431641 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-104316412023-08-17 Abundant, diverse, unknown: Extreme species richness and turnover despite drastic undersampling in two closely placed tropical Malaise traps Chimeno, Caroline Schmidt, Stefan Cancian de Araujo, Bruno Perez, Kate von Rintelen, Thomas Schmidt, Olga Hamid, Hasmiandy Pramesa Narakusumo, Raden Balke, Michael PLoS One Research Article Arthropods account for a large proportion of animal biomass and diversity in terrestrial systems, making them crucial organisms in our environments. However, still too little is known about the highly abundant and megadiverse groups that often make up the bulk of collected samples, especially in the tropics. With molecular identification techniques ever more evolving, analysis of arthropod communities has accelerated. In our study, which was conducted within the Global Malaise trap Program (GMP) framework, we operated two closely placed Malaise traps in Padang, Sumatra, for three months. We analyzed the samples by DNA barcoding and sequenced a total of more than 70,000 insect specimens. For sequence clustering, we applied three different delimitation techniques, namely RESL, ASAP, and SpeciesIdentifier, which gave similar results. Despite our (very) limited sampling in time and space, our efforts recovered more than 10,000 BINs, of which the majority are associated with “dark taxa”. Further analysis indicates a drastic undersampling of both sampling sites, meaning that the true arthropod diversity at our sampling sites is even higher. Regardless of the close proximity of both Malaise traps (< 360 m), we discovered significantly distinct communities. Public Library of Science 2023-08-16 /pmc/articles/PMC10431641/ /pubmed/37585425 http://dx.doi.org/10.1371/journal.pone.0290173 Text en © 2023 Chimeno et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Chimeno, Caroline Schmidt, Stefan Cancian de Araujo, Bruno Perez, Kate von Rintelen, Thomas Schmidt, Olga Hamid, Hasmiandy Pramesa Narakusumo, Raden Balke, Michael Abundant, diverse, unknown: Extreme species richness and turnover despite drastic undersampling in two closely placed tropical Malaise traps |
title | Abundant, diverse, unknown: Extreme species richness and turnover despite drastic undersampling in two closely placed tropical Malaise traps |
title_full | Abundant, diverse, unknown: Extreme species richness and turnover despite drastic undersampling in two closely placed tropical Malaise traps |
title_fullStr | Abundant, diverse, unknown: Extreme species richness and turnover despite drastic undersampling in two closely placed tropical Malaise traps |
title_full_unstemmed | Abundant, diverse, unknown: Extreme species richness and turnover despite drastic undersampling in two closely placed tropical Malaise traps |
title_short | Abundant, diverse, unknown: Extreme species richness and turnover despite drastic undersampling in two closely placed tropical Malaise traps |
title_sort | abundant, diverse, unknown: extreme species richness and turnover despite drastic undersampling in two closely placed tropical malaise traps |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10431641/ https://www.ncbi.nlm.nih.gov/pubmed/37585425 http://dx.doi.org/10.1371/journal.pone.0290173 |
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