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Link prediction on bipartite networks using matrix factorization with negative sample selection

We propose a new method for bipartite link prediction using matrix factorization with negative sample selection. Bipartite link prediction is a problem that aims to predict the missing links or relations in a bipartite network. One of the most popular solutions to the problem is via matrix factoriza...

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Detalles Bibliográficos
Autores principales: Peng, Siqi, Yamamoto, Akihiro, Ito, Kimihito
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10431684/
https://www.ncbi.nlm.nih.gov/pubmed/37585433
http://dx.doi.org/10.1371/journal.pone.0289568
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author Peng, Siqi
Yamamoto, Akihiro
Ito, Kimihito
author_facet Peng, Siqi
Yamamoto, Akihiro
Ito, Kimihito
author_sort Peng, Siqi
collection PubMed
description We propose a new method for bipartite link prediction using matrix factorization with negative sample selection. Bipartite link prediction is a problem that aims to predict the missing links or relations in a bipartite network. One of the most popular solutions to the problem is via matrix factorization (MF), which performs well but requires reliable information on both absent and present network links as training samples. This, however, is sometimes unavailable since there is no ground truth for absent links. To solve the problem, we propose a technique called negative sample selection, which selects reliable negative training samples using formal concept analysis (FCA) of a given bipartite network in advance of the preceding MF process. We conduct experiments on two hypothetical application scenarios to prove that our joint method outperforms the raw MF-based link prediction method as well as all other previously-proposed unsupervised link prediction methods.
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spelling pubmed-104316842023-08-17 Link prediction on bipartite networks using matrix factorization with negative sample selection Peng, Siqi Yamamoto, Akihiro Ito, Kimihito PLoS One Research Article We propose a new method for bipartite link prediction using matrix factorization with negative sample selection. Bipartite link prediction is a problem that aims to predict the missing links or relations in a bipartite network. One of the most popular solutions to the problem is via matrix factorization (MF), which performs well but requires reliable information on both absent and present network links as training samples. This, however, is sometimes unavailable since there is no ground truth for absent links. To solve the problem, we propose a technique called negative sample selection, which selects reliable negative training samples using formal concept analysis (FCA) of a given bipartite network in advance of the preceding MF process. We conduct experiments on two hypothetical application scenarios to prove that our joint method outperforms the raw MF-based link prediction method as well as all other previously-proposed unsupervised link prediction methods. Public Library of Science 2023-08-16 /pmc/articles/PMC10431684/ /pubmed/37585433 http://dx.doi.org/10.1371/journal.pone.0289568 Text en © 2023 Peng et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Peng, Siqi
Yamamoto, Akihiro
Ito, Kimihito
Link prediction on bipartite networks using matrix factorization with negative sample selection
title Link prediction on bipartite networks using matrix factorization with negative sample selection
title_full Link prediction on bipartite networks using matrix factorization with negative sample selection
title_fullStr Link prediction on bipartite networks using matrix factorization with negative sample selection
title_full_unstemmed Link prediction on bipartite networks using matrix factorization with negative sample selection
title_short Link prediction on bipartite networks using matrix factorization with negative sample selection
title_sort link prediction on bipartite networks using matrix factorization with negative sample selection
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10431684/
https://www.ncbi.nlm.nih.gov/pubmed/37585433
http://dx.doi.org/10.1371/journal.pone.0289568
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