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Regression calibration utilizing biomarkers developed from high-dimensional metabolites
Addressing systematic measurement errors in self-reported data is a critical challenge in association studies of dietary intake and chronic disease risk. The regression calibration method has been utilized for error correction when an objectively measured biomarker is available; however, biomarkers...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10433218/ https://www.ncbi.nlm.nih.gov/pubmed/37599686 http://dx.doi.org/10.3389/fnut.2023.1215768 |
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author | Zhang, Yiwen Dai, Ran Huang, Ying Prentice, Ross L. Zheng, Cheng |
author_facet | Zhang, Yiwen Dai, Ran Huang, Ying Prentice, Ross L. Zheng, Cheng |
author_sort | Zhang, Yiwen |
collection | PubMed |
description | Addressing systematic measurement errors in self-reported data is a critical challenge in association studies of dietary intake and chronic disease risk. The regression calibration method has been utilized for error correction when an objectively measured biomarker is available; however, biomarkers for only a few dietary components have been developed. This paper proposes to use high-dimensional objective measurements to construct biomarkers for many more dietary components and to estimate the diet disease associations. It also discusses the challenges in variance estimation in high-dimensional regression methods and presents a variety of techniques to address this issue, including cross-validation, degrees-of-freedom corrected estimators, and refitted cross-validation (RCV). Extensive simulation is performed to study the finite sample performance of the proposed estimators. The proposed method is applied to the Women's Health Initiative cohort data to examine the associations between the sodium/potassium intake ratio and the total cardiovascular disease. |
format | Online Article Text |
id | pubmed-10433218 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-104332182023-08-18 Regression calibration utilizing biomarkers developed from high-dimensional metabolites Zhang, Yiwen Dai, Ran Huang, Ying Prentice, Ross L. Zheng, Cheng Front Nutr Nutrition Addressing systematic measurement errors in self-reported data is a critical challenge in association studies of dietary intake and chronic disease risk. The regression calibration method has been utilized for error correction when an objectively measured biomarker is available; however, biomarkers for only a few dietary components have been developed. This paper proposes to use high-dimensional objective measurements to construct biomarkers for many more dietary components and to estimate the diet disease associations. It also discusses the challenges in variance estimation in high-dimensional regression methods and presents a variety of techniques to address this issue, including cross-validation, degrees-of-freedom corrected estimators, and refitted cross-validation (RCV). Extensive simulation is performed to study the finite sample performance of the proposed estimators. The proposed method is applied to the Women's Health Initiative cohort data to examine the associations between the sodium/potassium intake ratio and the total cardiovascular disease. Frontiers Media S.A. 2023-08-02 /pmc/articles/PMC10433218/ /pubmed/37599686 http://dx.doi.org/10.3389/fnut.2023.1215768 Text en Copyright © 2023 Zhang, Dai, Huang, Prentice and Zheng. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Nutrition Zhang, Yiwen Dai, Ran Huang, Ying Prentice, Ross L. Zheng, Cheng Regression calibration utilizing biomarkers developed from high-dimensional metabolites |
title | Regression calibration utilizing biomarkers developed from high-dimensional metabolites |
title_full | Regression calibration utilizing biomarkers developed from high-dimensional metabolites |
title_fullStr | Regression calibration utilizing biomarkers developed from high-dimensional metabolites |
title_full_unstemmed | Regression calibration utilizing biomarkers developed from high-dimensional metabolites |
title_short | Regression calibration utilizing biomarkers developed from high-dimensional metabolites |
title_sort | regression calibration utilizing biomarkers developed from high-dimensional metabolites |
topic | Nutrition |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10433218/ https://www.ncbi.nlm.nih.gov/pubmed/37599686 http://dx.doi.org/10.3389/fnut.2023.1215768 |
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