Cargando…
lncRNA and circRNA expression profiles in the hippocampus of Aβ(25‑35)‑induced AD mice treated with Tripterygium glycoside
Tripterygium glycosides (TG) have been reported to ameliorate Alzheimer's disease (AD), although the mechanism involved remains to be determined. In the present study, the lncRNA and circRNA expression profiles of an AD mouse model treated with TG were assessed using microarrays. lncRNAs, mRNAs...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
D.A. Spandidos
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10433443/ https://www.ncbi.nlm.nih.gov/pubmed/37602300 http://dx.doi.org/10.3892/etm.2023.12125 |
_version_ | 1785091648776044544 |
---|---|
author | Tang, Liang Wang, Yan Xiang, Ju Yang, Dawei Zhang, Yan Xiang, Qin Li, Jianming |
author_facet | Tang, Liang Wang, Yan Xiang, Ju Yang, Dawei Zhang, Yan Xiang, Qin Li, Jianming |
author_sort | Tang, Liang |
collection | PubMed |
description | Tripterygium glycosides (TG) have been reported to ameliorate Alzheimer's disease (AD), although the mechanism involved remains to be determined. In the present study, the lncRNA and circRNA expression profiles of an AD mouse model treated with TG were assessed using microarrays. lncRNAs, mRNAs, and circRNAs in the hippocampi of 3 AD+normal saline (NS) mice and 3 AD+TG mice were detected using microarrays. The most differentially expressed lncRNAs, mRNAs, and circRNAs were screened between the AD+NS and AD+TG groups. The differentially expressed lncRNAs and circRNAs were analyzed using GO enrichment and KEGG analyses. Co-expression analysis of lncRNAs, circRNAs, and mRNAs was performed by calculating the correlation coefficients. Protein-protein interaction (PPI) network analysis was performed on mRNAs using STRING. The lncRNA-target-transcription factor (TF) network was analyzed using the Network software. In total, 661 lncRNAs, 64 circRNAs, and 503 mRNAs were found to be differentially expressed in AD mice treated with TG. Pou4f1, Egr2, Mag, and Nr4a1 were the hub genes in the PPI network. The KEGG results showed that the mRNAs that were co-expressed with lncRNAs were enriched in the TNF, PI3K-Akt, and Wnt signaling pathways. LncRNA-target-TF network analysis indicated that TFs, including Cebpa, Zic2, and Rxra, were the most likely to regulate the detected lncRNAs. The circRNA-miRNA interaction network indicated that 275 miRNAs may bind to the 64 circRNAs. In conclusion, these findings provide a novel perspective on AD pathogenesis, and the detected lncRNAs, mRNAs, and circRNAs may serve as novel therapeutic targets for the management of AD. |
format | Online Article Text |
id | pubmed-10433443 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | D.A. Spandidos |
record_format | MEDLINE/PubMed |
spelling | pubmed-104334432023-08-18 lncRNA and circRNA expression profiles in the hippocampus of Aβ(25‑35)‑induced AD mice treated with Tripterygium glycoside Tang, Liang Wang, Yan Xiang, Ju Yang, Dawei Zhang, Yan Xiang, Qin Li, Jianming Exp Ther Med Articles Tripterygium glycosides (TG) have been reported to ameliorate Alzheimer's disease (AD), although the mechanism involved remains to be determined. In the present study, the lncRNA and circRNA expression profiles of an AD mouse model treated with TG were assessed using microarrays. lncRNAs, mRNAs, and circRNAs in the hippocampi of 3 AD+normal saline (NS) mice and 3 AD+TG mice were detected using microarrays. The most differentially expressed lncRNAs, mRNAs, and circRNAs were screened between the AD+NS and AD+TG groups. The differentially expressed lncRNAs and circRNAs were analyzed using GO enrichment and KEGG analyses. Co-expression analysis of lncRNAs, circRNAs, and mRNAs was performed by calculating the correlation coefficients. Protein-protein interaction (PPI) network analysis was performed on mRNAs using STRING. The lncRNA-target-transcription factor (TF) network was analyzed using the Network software. In total, 661 lncRNAs, 64 circRNAs, and 503 mRNAs were found to be differentially expressed in AD mice treated with TG. Pou4f1, Egr2, Mag, and Nr4a1 were the hub genes in the PPI network. The KEGG results showed that the mRNAs that were co-expressed with lncRNAs were enriched in the TNF, PI3K-Akt, and Wnt signaling pathways. LncRNA-target-TF network analysis indicated that TFs, including Cebpa, Zic2, and Rxra, were the most likely to regulate the detected lncRNAs. The circRNA-miRNA interaction network indicated that 275 miRNAs may bind to the 64 circRNAs. In conclusion, these findings provide a novel perspective on AD pathogenesis, and the detected lncRNAs, mRNAs, and circRNAs may serve as novel therapeutic targets for the management of AD. D.A. Spandidos 2023-07-19 /pmc/articles/PMC10433443/ /pubmed/37602300 http://dx.doi.org/10.3892/etm.2023.12125 Text en Copyright: © Tang et al. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made. |
spellingShingle | Articles Tang, Liang Wang, Yan Xiang, Ju Yang, Dawei Zhang, Yan Xiang, Qin Li, Jianming lncRNA and circRNA expression profiles in the hippocampus of Aβ(25‑35)‑induced AD mice treated with Tripterygium glycoside |
title | lncRNA and circRNA expression profiles in the hippocampus of Aβ(25‑35)‑induced AD mice treated with Tripterygium glycoside |
title_full | lncRNA and circRNA expression profiles in the hippocampus of Aβ(25‑35)‑induced AD mice treated with Tripterygium glycoside |
title_fullStr | lncRNA and circRNA expression profiles in the hippocampus of Aβ(25‑35)‑induced AD mice treated with Tripterygium glycoside |
title_full_unstemmed | lncRNA and circRNA expression profiles in the hippocampus of Aβ(25‑35)‑induced AD mice treated with Tripterygium glycoside |
title_short | lncRNA and circRNA expression profiles in the hippocampus of Aβ(25‑35)‑induced AD mice treated with Tripterygium glycoside |
title_sort | lncrna and circrna expression profiles in the hippocampus of aβ(25‑35)‑induced ad mice treated with tripterygium glycoside |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10433443/ https://www.ncbi.nlm.nih.gov/pubmed/37602300 http://dx.doi.org/10.3892/etm.2023.12125 |
work_keys_str_mv | AT tangliang lncrnaandcircrnaexpressionprofilesinthehippocampusofab2535inducedadmicetreatedwithtripterygiumglycoside AT wangyan lncrnaandcircrnaexpressionprofilesinthehippocampusofab2535inducedadmicetreatedwithtripterygiumglycoside AT xiangju lncrnaandcircrnaexpressionprofilesinthehippocampusofab2535inducedadmicetreatedwithtripterygiumglycoside AT yangdawei lncrnaandcircrnaexpressionprofilesinthehippocampusofab2535inducedadmicetreatedwithtripterygiumglycoside AT zhangyan lncrnaandcircrnaexpressionprofilesinthehippocampusofab2535inducedadmicetreatedwithtripterygiumglycoside AT xiangqin lncrnaandcircrnaexpressionprofilesinthehippocampusofab2535inducedadmicetreatedwithtripterygiumglycoside AT lijianming lncrnaandcircrnaexpressionprofilesinthehippocampusofab2535inducedadmicetreatedwithtripterygiumglycoside |