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Draft genome sequence of two “Candidatus Intestinicoccus colisanans” strains isolated from faeces of healthy humans

OBJECTIVES: In order to provide a better insight into the functional capacity of the human gut microbiome, we isolated a novel bacterium, “Candidatus Intestinicoccus colisanans” gen. nov. sp. nov., and performed whole genome sequencing. This study will provide new insights into the functional potent...

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Autores principales: Zhou, Joyce, Boyd, Joel A, Nyeverecz, Bozica, Vivian, Charlotte, Angel, Nicola, Wood, David L A, Hugenholtz, Philip, Tyson, Gene W, Krause, Lutz, Ó Cuív, Páraic
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10433555/
https://www.ncbi.nlm.nih.gov/pubmed/37592350
http://dx.doi.org/10.1186/s13104-023-06447-3
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author Zhou, Joyce
Boyd, Joel A
Nyeverecz, Bozica
Vivian, Charlotte
Angel, Nicola
Wood, David L A
Hugenholtz, Philip
Tyson, Gene W
Krause, Lutz
Ó Cuív, Páraic
author_facet Zhou, Joyce
Boyd, Joel A
Nyeverecz, Bozica
Vivian, Charlotte
Angel, Nicola
Wood, David L A
Hugenholtz, Philip
Tyson, Gene W
Krause, Lutz
Ó Cuív, Páraic
author_sort Zhou, Joyce
collection PubMed
description OBJECTIVES: In order to provide a better insight into the functional capacity of the human gut microbiome, we isolated a novel bacterium, “Candidatus Intestinicoccus colisanans” gen. nov. sp. nov., and performed whole genome sequencing. This study will provide new insights into the functional potential of this bacterium and its role in modulating host health and well-being. We expect that this data resource will be useful in providing additional insight into the diversity and functional potential of the human microbiome. DATA DESCRIPTION: Here, we report the first draft genome sequences of “Candidatus Intestinicoccus colisanans” strains MH27-1 and MH27-2, recovered from faeces collected from healthy human donors. The genomes were sequenced using short-read Illumina technology and whole-genome-based comparisons and phylogenomics reconstruction indicate that “Candidatus Intestinicoccus colisanans” represents a novel genus and species within the family Acutalibacteraceae. Both genomes were estimated to be > 98% completed and to range in size from 2.9 to 3.3 Mb with a G + C content of approximately 51%. The gene repertoire of “Candidatus Intestinicoccus colisanans” indicate it is likely a saccharolytic gut bacterium. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13104-023-06447-3.
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spelling pubmed-104335552023-08-18 Draft genome sequence of two “Candidatus Intestinicoccus colisanans” strains isolated from faeces of healthy humans Zhou, Joyce Boyd, Joel A Nyeverecz, Bozica Vivian, Charlotte Angel, Nicola Wood, David L A Hugenholtz, Philip Tyson, Gene W Krause, Lutz Ó Cuív, Páraic BMC Res Notes Data Note OBJECTIVES: In order to provide a better insight into the functional capacity of the human gut microbiome, we isolated a novel bacterium, “Candidatus Intestinicoccus colisanans” gen. nov. sp. nov., and performed whole genome sequencing. This study will provide new insights into the functional potential of this bacterium and its role in modulating host health and well-being. We expect that this data resource will be useful in providing additional insight into the diversity and functional potential of the human microbiome. DATA DESCRIPTION: Here, we report the first draft genome sequences of “Candidatus Intestinicoccus colisanans” strains MH27-1 and MH27-2, recovered from faeces collected from healthy human donors. The genomes were sequenced using short-read Illumina technology and whole-genome-based comparisons and phylogenomics reconstruction indicate that “Candidatus Intestinicoccus colisanans” represents a novel genus and species within the family Acutalibacteraceae. Both genomes were estimated to be > 98% completed and to range in size from 2.9 to 3.3 Mb with a G + C content of approximately 51%. The gene repertoire of “Candidatus Intestinicoccus colisanans” indicate it is likely a saccharolytic gut bacterium. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13104-023-06447-3. BioMed Central 2023-08-17 /pmc/articles/PMC10433555/ /pubmed/37592350 http://dx.doi.org/10.1186/s13104-023-06447-3 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Data Note
Zhou, Joyce
Boyd, Joel A
Nyeverecz, Bozica
Vivian, Charlotte
Angel, Nicola
Wood, David L A
Hugenholtz, Philip
Tyson, Gene W
Krause, Lutz
Ó Cuív, Páraic
Draft genome sequence of two “Candidatus Intestinicoccus colisanans” strains isolated from faeces of healthy humans
title Draft genome sequence of two “Candidatus Intestinicoccus colisanans” strains isolated from faeces of healthy humans
title_full Draft genome sequence of two “Candidatus Intestinicoccus colisanans” strains isolated from faeces of healthy humans
title_fullStr Draft genome sequence of two “Candidatus Intestinicoccus colisanans” strains isolated from faeces of healthy humans
title_full_unstemmed Draft genome sequence of two “Candidatus Intestinicoccus colisanans” strains isolated from faeces of healthy humans
title_short Draft genome sequence of two “Candidatus Intestinicoccus colisanans” strains isolated from faeces of healthy humans
title_sort draft genome sequence of two “candidatus intestinicoccus colisanans” strains isolated from faeces of healthy humans
topic Data Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10433555/
https://www.ncbi.nlm.nih.gov/pubmed/37592350
http://dx.doi.org/10.1186/s13104-023-06447-3
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