The complete mitochondrial genome of Helicana japonica (Crustacea, Decapoda, Varunidae) from South Korea

Helicana japonica mainly inhabits burrowed holes in the mudflats and intertidal zones. Specimens from the Republic of Korea were collected and whole genomic DNA from the cheliped muscle tissue was extracted. We determined the complete mitochondrial genome using Illumina HiSeq X Ten. The mitogenome i...

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Autores principales: Kim, Ji-Min, Kim, Hyung-Seop, Yi, Chang-Ho
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2023
Materias:
MitoGenome Report
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10434999/
https://www.ncbi.nlm.nih.gov/pubmed/37600504
http://dx.doi.org/10.1080/23802359.2023.2246686
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author Kim, Ji-Min
Kim, Hyung-Seop
Yi, Chang-Ho
author_facet Kim, Ji-Min
Kim, Hyung-Seop
Yi, Chang-Ho
author_sort Kim, Ji-Min
collection PubMed
description Helicana japonica mainly inhabits burrowed holes in the mudflats and intertidal zones. Specimens from the Republic of Korea were collected and whole genomic DNA from the cheliped muscle tissue was extracted. We determined the complete mitochondrial genome using Illumina HiSeq X Ten. The mitogenome is 16,535 bp in length and consists of 13 protein-coding genes, 2 rRNA genes, and 22 tRNA genes. A phylogenetic tree was reconstructed using the maximum-likelihood of phylogeny methods. H. japonica formed a sister clade with Helicana wuana, which is another Helicana species.
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spelling pubmed-104349992023-08-18 The complete mitochondrial genome of Helicana japonica (Crustacea, Decapoda, Varunidae) from South Korea Kim, Ji-Min Kim, Hyung-Seop Yi, Chang-Ho Mitochondrial DNA B Resour MitoGenome Report Helicana japonica mainly inhabits burrowed holes in the mudflats and intertidal zones. Specimens from the Republic of Korea were collected and whole genomic DNA from the cheliped muscle tissue was extracted. We determined the complete mitochondrial genome using Illumina HiSeq X Ten. The mitogenome is 16,535 bp in length and consists of 13 protein-coding genes, 2 rRNA genes, and 22 tRNA genes. A phylogenetic tree was reconstructed using the maximum-likelihood of phylogeny methods. H. japonica formed a sister clade with Helicana wuana, which is another Helicana species. Taylor & Francis 2023-08-16 /pmc/articles/PMC10434999/ /pubmed/37600504 http://dx.doi.org/10.1080/23802359.2023.2246686 Text en © 2023 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. The terms on which this article has been published allow the posting of the Accepted Manuscript in a repository by the author(s) or with their consent.
spellingShingle MitoGenome Report
Kim, Ji-Min
Kim, Hyung-Seop
Yi, Chang-Ho
The complete mitochondrial genome of Helicana japonica (Crustacea, Decapoda, Varunidae) from South Korea
title The complete mitochondrial genome of Helicana japonica (Crustacea, Decapoda, Varunidae) from South Korea
title_full The complete mitochondrial genome of Helicana japonica (Crustacea, Decapoda, Varunidae) from South Korea
title_fullStr The complete mitochondrial genome of Helicana japonica (Crustacea, Decapoda, Varunidae) from South Korea
title_full_unstemmed The complete mitochondrial genome of Helicana japonica (Crustacea, Decapoda, Varunidae) from South Korea
title_short The complete mitochondrial genome of Helicana japonica (Crustacea, Decapoda, Varunidae) from South Korea
title_sort complete mitochondrial genome of helicana japonica (crustacea, decapoda, varunidae) from south korea
topic MitoGenome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10434999/
https://www.ncbi.nlm.nih.gov/pubmed/37600504
http://dx.doi.org/10.1080/23802359.2023.2246686
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