Cargando…

Transcriptional profiling of canine osteosarcoma identifies prognostic gene expression signatures with translational value for humans

Canine osteosarcoma is increasingly recognized as an informative model for human osteosarcoma. Here we show in one of the largest clinically annotated canine osteosarcoma transcriptional datasets that two previously reported, as well as de novo gene signatures devised through single sample Gene Set...

Descripción completa

Detalles Bibliográficos
Autores principales: Mannheimer, Joshua D., Tawa, Gregory, Gerhold, David, Braisted, John, Sayers, Carly M., McEachron, Troy A., Meltzer, Paul, Mazcko, Christina, Beck, Jessica A., LeBlanc, Amy K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10435536/
https://www.ncbi.nlm.nih.gov/pubmed/37591946
http://dx.doi.org/10.1038/s42003-023-05208-z
_version_ 1785092121201475584
author Mannheimer, Joshua D.
Tawa, Gregory
Gerhold, David
Braisted, John
Sayers, Carly M.
McEachron, Troy A.
Meltzer, Paul
Mazcko, Christina
Beck, Jessica A.
LeBlanc, Amy K.
author_facet Mannheimer, Joshua D.
Tawa, Gregory
Gerhold, David
Braisted, John
Sayers, Carly M.
McEachron, Troy A.
Meltzer, Paul
Mazcko, Christina
Beck, Jessica A.
LeBlanc, Amy K.
author_sort Mannheimer, Joshua D.
collection PubMed
description Canine osteosarcoma is increasingly recognized as an informative model for human osteosarcoma. Here we show in one of the largest clinically annotated canine osteosarcoma transcriptional datasets that two previously reported, as well as de novo gene signatures devised through single sample Gene Set Enrichment Analysis (ssGSEA), have prognostic utility in both human and canine patients. Shared molecular pathway alterations are seen in immune cell signaling and activation including TH1 and TH2 signaling, interferon signaling, and inflammatory responses. Virtual cell sorting to estimate immune cell populations within canine and human tumors showed similar trends, predominantly for macrophages and CD8+ T cells. Immunohistochemical staining verified the increased presence of immune cells in tumors exhibiting immune gene enrichment. Collectively these findings further validate naturally occurring osteosarcoma of the pet dog as a translationally relevant patient model for humans and improve our understanding of the immunologic and genomic landscape of the disease in both species.
format Online
Article
Text
id pubmed-10435536
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-104355362023-08-19 Transcriptional profiling of canine osteosarcoma identifies prognostic gene expression signatures with translational value for humans Mannheimer, Joshua D. Tawa, Gregory Gerhold, David Braisted, John Sayers, Carly M. McEachron, Troy A. Meltzer, Paul Mazcko, Christina Beck, Jessica A. LeBlanc, Amy K. Commun Biol Article Canine osteosarcoma is increasingly recognized as an informative model for human osteosarcoma. Here we show in one of the largest clinically annotated canine osteosarcoma transcriptional datasets that two previously reported, as well as de novo gene signatures devised through single sample Gene Set Enrichment Analysis (ssGSEA), have prognostic utility in both human and canine patients. Shared molecular pathway alterations are seen in immune cell signaling and activation including TH1 and TH2 signaling, interferon signaling, and inflammatory responses. Virtual cell sorting to estimate immune cell populations within canine and human tumors showed similar trends, predominantly for macrophages and CD8+ T cells. Immunohistochemical staining verified the increased presence of immune cells in tumors exhibiting immune gene enrichment. Collectively these findings further validate naturally occurring osteosarcoma of the pet dog as a translationally relevant patient model for humans and improve our understanding of the immunologic and genomic landscape of the disease in both species. Nature Publishing Group UK 2023-08-17 /pmc/articles/PMC10435536/ /pubmed/37591946 http://dx.doi.org/10.1038/s42003-023-05208-z Text en © This is a U.S. Government work and not under copyright protection in the US; foreign copyright protection may apply 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Mannheimer, Joshua D.
Tawa, Gregory
Gerhold, David
Braisted, John
Sayers, Carly M.
McEachron, Troy A.
Meltzer, Paul
Mazcko, Christina
Beck, Jessica A.
LeBlanc, Amy K.
Transcriptional profiling of canine osteosarcoma identifies prognostic gene expression signatures with translational value for humans
title Transcriptional profiling of canine osteosarcoma identifies prognostic gene expression signatures with translational value for humans
title_full Transcriptional profiling of canine osteosarcoma identifies prognostic gene expression signatures with translational value for humans
title_fullStr Transcriptional profiling of canine osteosarcoma identifies prognostic gene expression signatures with translational value for humans
title_full_unstemmed Transcriptional profiling of canine osteosarcoma identifies prognostic gene expression signatures with translational value for humans
title_short Transcriptional profiling of canine osteosarcoma identifies prognostic gene expression signatures with translational value for humans
title_sort transcriptional profiling of canine osteosarcoma identifies prognostic gene expression signatures with translational value for humans
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10435536/
https://www.ncbi.nlm.nih.gov/pubmed/37591946
http://dx.doi.org/10.1038/s42003-023-05208-z
work_keys_str_mv AT mannheimerjoshuad transcriptionalprofilingofcanineosteosarcomaidentifiesprognosticgeneexpressionsignatureswithtranslationalvalueforhumans
AT tawagregory transcriptionalprofilingofcanineosteosarcomaidentifiesprognosticgeneexpressionsignatureswithtranslationalvalueforhumans
AT gerholddavid transcriptionalprofilingofcanineosteosarcomaidentifiesprognosticgeneexpressionsignatureswithtranslationalvalueforhumans
AT braistedjohn transcriptionalprofilingofcanineosteosarcomaidentifiesprognosticgeneexpressionsignatureswithtranslationalvalueforhumans
AT sayerscarlym transcriptionalprofilingofcanineosteosarcomaidentifiesprognosticgeneexpressionsignatureswithtranslationalvalueforhumans
AT mceachrontroya transcriptionalprofilingofcanineosteosarcomaidentifiesprognosticgeneexpressionsignatureswithtranslationalvalueforhumans
AT meltzerpaul transcriptionalprofilingofcanineosteosarcomaidentifiesprognosticgeneexpressionsignatureswithtranslationalvalueforhumans
AT mazckochristina transcriptionalprofilingofcanineosteosarcomaidentifiesprognosticgeneexpressionsignatureswithtranslationalvalueforhumans
AT beckjessicaa transcriptionalprofilingofcanineosteosarcomaidentifiesprognosticgeneexpressionsignatureswithtranslationalvalueforhumans
AT leblancamyk transcriptionalprofilingofcanineosteosarcomaidentifiesprognosticgeneexpressionsignatureswithtranslationalvalueforhumans