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Transcriptional profiling of canine osteosarcoma identifies prognostic gene expression signatures with translational value for humans
Canine osteosarcoma is increasingly recognized as an informative model for human osteosarcoma. Here we show in one of the largest clinically annotated canine osteosarcoma transcriptional datasets that two previously reported, as well as de novo gene signatures devised through single sample Gene Set...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10435536/ https://www.ncbi.nlm.nih.gov/pubmed/37591946 http://dx.doi.org/10.1038/s42003-023-05208-z |
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author | Mannheimer, Joshua D. Tawa, Gregory Gerhold, David Braisted, John Sayers, Carly M. McEachron, Troy A. Meltzer, Paul Mazcko, Christina Beck, Jessica A. LeBlanc, Amy K. |
author_facet | Mannheimer, Joshua D. Tawa, Gregory Gerhold, David Braisted, John Sayers, Carly M. McEachron, Troy A. Meltzer, Paul Mazcko, Christina Beck, Jessica A. LeBlanc, Amy K. |
author_sort | Mannheimer, Joshua D. |
collection | PubMed |
description | Canine osteosarcoma is increasingly recognized as an informative model for human osteosarcoma. Here we show in one of the largest clinically annotated canine osteosarcoma transcriptional datasets that two previously reported, as well as de novo gene signatures devised through single sample Gene Set Enrichment Analysis (ssGSEA), have prognostic utility in both human and canine patients. Shared molecular pathway alterations are seen in immune cell signaling and activation including TH1 and TH2 signaling, interferon signaling, and inflammatory responses. Virtual cell sorting to estimate immune cell populations within canine and human tumors showed similar trends, predominantly for macrophages and CD8+ T cells. Immunohistochemical staining verified the increased presence of immune cells in tumors exhibiting immune gene enrichment. Collectively these findings further validate naturally occurring osteosarcoma of the pet dog as a translationally relevant patient model for humans and improve our understanding of the immunologic and genomic landscape of the disease in both species. |
format | Online Article Text |
id | pubmed-10435536 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-104355362023-08-19 Transcriptional profiling of canine osteosarcoma identifies prognostic gene expression signatures with translational value for humans Mannheimer, Joshua D. Tawa, Gregory Gerhold, David Braisted, John Sayers, Carly M. McEachron, Troy A. Meltzer, Paul Mazcko, Christina Beck, Jessica A. LeBlanc, Amy K. Commun Biol Article Canine osteosarcoma is increasingly recognized as an informative model for human osteosarcoma. Here we show in one of the largest clinically annotated canine osteosarcoma transcriptional datasets that two previously reported, as well as de novo gene signatures devised through single sample Gene Set Enrichment Analysis (ssGSEA), have prognostic utility in both human and canine patients. Shared molecular pathway alterations are seen in immune cell signaling and activation including TH1 and TH2 signaling, interferon signaling, and inflammatory responses. Virtual cell sorting to estimate immune cell populations within canine and human tumors showed similar trends, predominantly for macrophages and CD8+ T cells. Immunohistochemical staining verified the increased presence of immune cells in tumors exhibiting immune gene enrichment. Collectively these findings further validate naturally occurring osteosarcoma of the pet dog as a translationally relevant patient model for humans and improve our understanding of the immunologic and genomic landscape of the disease in both species. Nature Publishing Group UK 2023-08-17 /pmc/articles/PMC10435536/ /pubmed/37591946 http://dx.doi.org/10.1038/s42003-023-05208-z Text en © This is a U.S. Government work and not under copyright protection in the US; foreign copyright protection may apply 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Mannheimer, Joshua D. Tawa, Gregory Gerhold, David Braisted, John Sayers, Carly M. McEachron, Troy A. Meltzer, Paul Mazcko, Christina Beck, Jessica A. LeBlanc, Amy K. Transcriptional profiling of canine osteosarcoma identifies prognostic gene expression signatures with translational value for humans |
title | Transcriptional profiling of canine osteosarcoma identifies prognostic gene expression signatures with translational value for humans |
title_full | Transcriptional profiling of canine osteosarcoma identifies prognostic gene expression signatures with translational value for humans |
title_fullStr | Transcriptional profiling of canine osteosarcoma identifies prognostic gene expression signatures with translational value for humans |
title_full_unstemmed | Transcriptional profiling of canine osteosarcoma identifies prognostic gene expression signatures with translational value for humans |
title_short | Transcriptional profiling of canine osteosarcoma identifies prognostic gene expression signatures with translational value for humans |
title_sort | transcriptional profiling of canine osteosarcoma identifies prognostic gene expression signatures with translational value for humans |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10435536/ https://www.ncbi.nlm.nih.gov/pubmed/37591946 http://dx.doi.org/10.1038/s42003-023-05208-z |
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