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Molecular docking as a tool for the discovery of molecular targets of nutraceuticals in diseases management

Molecular docking is a computational technique that predicts the binding affinity of ligands to receptor proteins. Although it has potential uses in nutraceutical research, it has developed into a formidable tool for drug development. Bioactive substances called nutraceuticals are present in food so...

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Autores principales: Agu, P. C., Afiukwa, C. A., Orji, O. U., Ezeh, E. M., Ofoke, I. H., Ogbu, C. O., Ugwuja, E. I., Aja, P. M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10435576/
https://www.ncbi.nlm.nih.gov/pubmed/37592012
http://dx.doi.org/10.1038/s41598-023-40160-2
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author Agu, P. C.
Afiukwa, C. A.
Orji, O. U.
Ezeh, E. M.
Ofoke, I. H.
Ogbu, C. O.
Ugwuja, E. I.
Aja, P. M.
author_facet Agu, P. C.
Afiukwa, C. A.
Orji, O. U.
Ezeh, E. M.
Ofoke, I. H.
Ogbu, C. O.
Ugwuja, E. I.
Aja, P. M.
author_sort Agu, P. C.
collection PubMed
description Molecular docking is a computational technique that predicts the binding affinity of ligands to receptor proteins. Although it has potential uses in nutraceutical research, it has developed into a formidable tool for drug development. Bioactive substances called nutraceuticals are present in food sources and can be used in the management of diseases. Finding their molecular targets can help in the creation of disease-specific new therapies. The purpose of this review was to explore molecular docking's application to the study of dietary supplements and disease management. First, an overview of the fundamentals of molecular docking and the various software tools available for docking was presented. The limitations and difficulties of using molecular docking in nutraceutical research are also covered, including the reliability of scoring functions and the requirement for experimental validation. Additionally, there was a focus on the identification of molecular targets for nutraceuticals in numerous disease models, including those for sickle cell disease, cancer, cardiovascular, gut, reproductive, and neurodegenerative disorders. We further highlighted biochemistry pathways and models from recent studies that have revealed molecular mechanisms to pinpoint new nutraceuticals' effects on disease pathogenesis. It is convincingly true that molecular docking is a useful tool for identifying the molecular targets of nutraceuticals in the management of diseases. It may offer information about how nutraceuticals work and support the creation of new therapeutics. Therefore, molecular docking has a bright future in nutraceutical research and has a lot of potentials to lead to the creation of brand-new medicines for the treatment of disease.
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spelling pubmed-104355762023-08-19 Molecular docking as a tool for the discovery of molecular targets of nutraceuticals in diseases management Agu, P. C. Afiukwa, C. A. Orji, O. U. Ezeh, E. M. Ofoke, I. H. Ogbu, C. O. Ugwuja, E. I. Aja, P. M. Sci Rep Article Molecular docking is a computational technique that predicts the binding affinity of ligands to receptor proteins. Although it has potential uses in nutraceutical research, it has developed into a formidable tool for drug development. Bioactive substances called nutraceuticals are present in food sources and can be used in the management of diseases. Finding their molecular targets can help in the creation of disease-specific new therapies. The purpose of this review was to explore molecular docking's application to the study of dietary supplements and disease management. First, an overview of the fundamentals of molecular docking and the various software tools available for docking was presented. The limitations and difficulties of using molecular docking in nutraceutical research are also covered, including the reliability of scoring functions and the requirement for experimental validation. Additionally, there was a focus on the identification of molecular targets for nutraceuticals in numerous disease models, including those for sickle cell disease, cancer, cardiovascular, gut, reproductive, and neurodegenerative disorders. We further highlighted biochemistry pathways and models from recent studies that have revealed molecular mechanisms to pinpoint new nutraceuticals' effects on disease pathogenesis. It is convincingly true that molecular docking is a useful tool for identifying the molecular targets of nutraceuticals in the management of diseases. It may offer information about how nutraceuticals work and support the creation of new therapeutics. Therefore, molecular docking has a bright future in nutraceutical research and has a lot of potentials to lead to the creation of brand-new medicines for the treatment of disease. Nature Publishing Group UK 2023-08-17 /pmc/articles/PMC10435576/ /pubmed/37592012 http://dx.doi.org/10.1038/s41598-023-40160-2 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Agu, P. C.
Afiukwa, C. A.
Orji, O. U.
Ezeh, E. M.
Ofoke, I. H.
Ogbu, C. O.
Ugwuja, E. I.
Aja, P. M.
Molecular docking as a tool for the discovery of molecular targets of nutraceuticals in diseases management
title Molecular docking as a tool for the discovery of molecular targets of nutraceuticals in diseases management
title_full Molecular docking as a tool for the discovery of molecular targets of nutraceuticals in diseases management
title_fullStr Molecular docking as a tool for the discovery of molecular targets of nutraceuticals in diseases management
title_full_unstemmed Molecular docking as a tool for the discovery of molecular targets of nutraceuticals in diseases management
title_short Molecular docking as a tool for the discovery of molecular targets of nutraceuticals in diseases management
title_sort molecular docking as a tool for the discovery of molecular targets of nutraceuticals in diseases management
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10435576/
https://www.ncbi.nlm.nih.gov/pubmed/37592012
http://dx.doi.org/10.1038/s41598-023-40160-2
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