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Development and validation of a deep learning pipeline to measure pericardial effusion in echocardiography
OBJECTIVES: The aim of this study was to develop a deep-learning pipeline for the measurement of pericardial effusion (PE) based on raw echocardiography clips, as current methods for PE measurement can be operator-dependent and present challenges in certain situations. METHODS: The proposed pipeline...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10436508/ https://www.ncbi.nlm.nih.gov/pubmed/37600054 http://dx.doi.org/10.3389/fcvm.2023.1195235 |
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author | Cheng, Chi-Yung Wu, Cheng-Ching Chen, Huang-Chung Hung, Chun-Hui Chen, Tien-Yu Lin, Chun-Hung Richard Chiu, I-Min |
author_facet | Cheng, Chi-Yung Wu, Cheng-Ching Chen, Huang-Chung Hung, Chun-Hui Chen, Tien-Yu Lin, Chun-Hung Richard Chiu, I-Min |
author_sort | Cheng, Chi-Yung |
collection | PubMed |
description | OBJECTIVES: The aim of this study was to develop a deep-learning pipeline for the measurement of pericardial effusion (PE) based on raw echocardiography clips, as current methods for PE measurement can be operator-dependent and present challenges in certain situations. METHODS: The proposed pipeline consisted of three distinct steps: moving window view selection (MWVS), automated segmentation, and width calculation from a segmented mask. The MWVS model utilized the ResNet architecture to classify each frame of the extracted raw echocardiography files into selected view types. The automated segmentation step then generated a mask for the PE area from the extracted echocardiography clip, and a computer vision technique was used to calculate the largest width of the PE from the segmented mask. The pipeline was applied to a total of 995 echocardiographic examinations. RESULTS: The proposed deep-learning pipeline exhibited high performance, as evidenced by intraclass correlation coefficient (ICC) values of 0.867 for internal validation and 0.801 for external validation. The pipeline demonstrated a high level of accuracy in detecting PE, with an area under the receiving operating characteristic curve (AUC) of 0.926 (95% CI: 0.902–0.951) for internal validation and 0.842 (95% CI: 0.794–0.889) for external validation. CONCLUSION: The machine-learning pipeline developed in this study can automatically calculate the width of PE from raw ultrasound clips. The novel concepts of moving window view selection for image quality control and computer vision techniques for maximal PE width calculation seem useful in the field of ultrasound. This pipeline could potentially provide a standardized and objective approach to the measurement of PE, reducing operator-dependency and improving accuracy. |
format | Online Article Text |
id | pubmed-10436508 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-104365082023-08-19 Development and validation of a deep learning pipeline to measure pericardial effusion in echocardiography Cheng, Chi-Yung Wu, Cheng-Ching Chen, Huang-Chung Hung, Chun-Hui Chen, Tien-Yu Lin, Chun-Hung Richard Chiu, I-Min Front Cardiovasc Med Cardiovascular Medicine OBJECTIVES: The aim of this study was to develop a deep-learning pipeline for the measurement of pericardial effusion (PE) based on raw echocardiography clips, as current methods for PE measurement can be operator-dependent and present challenges in certain situations. METHODS: The proposed pipeline consisted of three distinct steps: moving window view selection (MWVS), automated segmentation, and width calculation from a segmented mask. The MWVS model utilized the ResNet architecture to classify each frame of the extracted raw echocardiography files into selected view types. The automated segmentation step then generated a mask for the PE area from the extracted echocardiography clip, and a computer vision technique was used to calculate the largest width of the PE from the segmented mask. The pipeline was applied to a total of 995 echocardiographic examinations. RESULTS: The proposed deep-learning pipeline exhibited high performance, as evidenced by intraclass correlation coefficient (ICC) values of 0.867 for internal validation and 0.801 for external validation. The pipeline demonstrated a high level of accuracy in detecting PE, with an area under the receiving operating characteristic curve (AUC) of 0.926 (95% CI: 0.902–0.951) for internal validation and 0.842 (95% CI: 0.794–0.889) for external validation. CONCLUSION: The machine-learning pipeline developed in this study can automatically calculate the width of PE from raw ultrasound clips. The novel concepts of moving window view selection for image quality control and computer vision techniques for maximal PE width calculation seem useful in the field of ultrasound. This pipeline could potentially provide a standardized and objective approach to the measurement of PE, reducing operator-dependency and improving accuracy. Frontiers Media S.A. 2023-08-04 /pmc/articles/PMC10436508/ /pubmed/37600054 http://dx.doi.org/10.3389/fcvm.2023.1195235 Text en © 2023 Cheng, Wu, Chen, Hung, Chen, Lin and Chiu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY) (https://creativecommons.org/licenses/by/4.0/) . The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Cardiovascular Medicine Cheng, Chi-Yung Wu, Cheng-Ching Chen, Huang-Chung Hung, Chun-Hui Chen, Tien-Yu Lin, Chun-Hung Richard Chiu, I-Min Development and validation of a deep learning pipeline to measure pericardial effusion in echocardiography |
title | Development and validation of a deep learning pipeline to measure pericardial effusion in echocardiography |
title_full | Development and validation of a deep learning pipeline to measure pericardial effusion in echocardiography |
title_fullStr | Development and validation of a deep learning pipeline to measure pericardial effusion in echocardiography |
title_full_unstemmed | Development and validation of a deep learning pipeline to measure pericardial effusion in echocardiography |
title_short | Development and validation of a deep learning pipeline to measure pericardial effusion in echocardiography |
title_sort | development and validation of a deep learning pipeline to measure pericardial effusion in echocardiography |
topic | Cardiovascular Medicine |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10436508/ https://www.ncbi.nlm.nih.gov/pubmed/37600054 http://dx.doi.org/10.3389/fcvm.2023.1195235 |
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