Cargando…

Development and validation of a deep learning pipeline to measure pericardial effusion in echocardiography

OBJECTIVES: The aim of this study was to develop a deep-learning pipeline for the measurement of pericardial effusion (PE) based on raw echocardiography clips, as current methods for PE measurement can be operator-dependent and present challenges in certain situations. METHODS: The proposed pipeline...

Descripción completa

Detalles Bibliográficos
Autores principales: Cheng, Chi-Yung, Wu, Cheng-Ching, Chen, Huang-Chung, Hung, Chun-Hui, Chen, Tien-Yu, Lin, Chun-Hung Richard, Chiu, I-Min
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10436508/
https://www.ncbi.nlm.nih.gov/pubmed/37600054
http://dx.doi.org/10.3389/fcvm.2023.1195235
_version_ 1785092345542213632
author Cheng, Chi-Yung
Wu, Cheng-Ching
Chen, Huang-Chung
Hung, Chun-Hui
Chen, Tien-Yu
Lin, Chun-Hung Richard
Chiu, I-Min
author_facet Cheng, Chi-Yung
Wu, Cheng-Ching
Chen, Huang-Chung
Hung, Chun-Hui
Chen, Tien-Yu
Lin, Chun-Hung Richard
Chiu, I-Min
author_sort Cheng, Chi-Yung
collection PubMed
description OBJECTIVES: The aim of this study was to develop a deep-learning pipeline for the measurement of pericardial effusion (PE) based on raw echocardiography clips, as current methods for PE measurement can be operator-dependent and present challenges in certain situations. METHODS: The proposed pipeline consisted of three distinct steps: moving window view selection (MWVS), automated segmentation, and width calculation from a segmented mask. The MWVS model utilized the ResNet architecture to classify each frame of the extracted raw echocardiography files into selected view types. The automated segmentation step then generated a mask for the PE area from the extracted echocardiography clip, and a computer vision technique was used to calculate the largest width of the PE from the segmented mask. The pipeline was applied to a total of 995 echocardiographic examinations. RESULTS: The proposed deep-learning pipeline exhibited high performance, as evidenced by intraclass correlation coefficient (ICC) values of 0.867 for internal validation and 0.801 for external validation. The pipeline demonstrated a high level of accuracy in detecting PE, with an area under the receiving operating characteristic curve (AUC) of 0.926 (95% CI: 0.902–0.951) for internal validation and 0.842 (95% CI: 0.794–0.889) for external validation. CONCLUSION: The machine-learning pipeline developed in this study can automatically calculate the width of PE from raw ultrasound clips. The novel concepts of moving window view selection for image quality control and computer vision techniques for maximal PE width calculation seem useful in the field of ultrasound. This pipeline could potentially provide a standardized and objective approach to the measurement of PE, reducing operator-dependency and improving accuracy.
format Online
Article
Text
id pubmed-10436508
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-104365082023-08-19 Development and validation of a deep learning pipeline to measure pericardial effusion in echocardiography Cheng, Chi-Yung Wu, Cheng-Ching Chen, Huang-Chung Hung, Chun-Hui Chen, Tien-Yu Lin, Chun-Hung Richard Chiu, I-Min Front Cardiovasc Med Cardiovascular Medicine OBJECTIVES: The aim of this study was to develop a deep-learning pipeline for the measurement of pericardial effusion (PE) based on raw echocardiography clips, as current methods for PE measurement can be operator-dependent and present challenges in certain situations. METHODS: The proposed pipeline consisted of three distinct steps: moving window view selection (MWVS), automated segmentation, and width calculation from a segmented mask. The MWVS model utilized the ResNet architecture to classify each frame of the extracted raw echocardiography files into selected view types. The automated segmentation step then generated a mask for the PE area from the extracted echocardiography clip, and a computer vision technique was used to calculate the largest width of the PE from the segmented mask. The pipeline was applied to a total of 995 echocardiographic examinations. RESULTS: The proposed deep-learning pipeline exhibited high performance, as evidenced by intraclass correlation coefficient (ICC) values of 0.867 for internal validation and 0.801 for external validation. The pipeline demonstrated a high level of accuracy in detecting PE, with an area under the receiving operating characteristic curve (AUC) of 0.926 (95% CI: 0.902–0.951) for internal validation and 0.842 (95% CI: 0.794–0.889) for external validation. CONCLUSION: The machine-learning pipeline developed in this study can automatically calculate the width of PE from raw ultrasound clips. The novel concepts of moving window view selection for image quality control and computer vision techniques for maximal PE width calculation seem useful in the field of ultrasound. This pipeline could potentially provide a standardized and objective approach to the measurement of PE, reducing operator-dependency and improving accuracy. Frontiers Media S.A. 2023-08-04 /pmc/articles/PMC10436508/ /pubmed/37600054 http://dx.doi.org/10.3389/fcvm.2023.1195235 Text en © 2023 Cheng, Wu, Chen, Hung, Chen, Lin and Chiu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY) (https://creativecommons.org/licenses/by/4.0/) . The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Cardiovascular Medicine
Cheng, Chi-Yung
Wu, Cheng-Ching
Chen, Huang-Chung
Hung, Chun-Hui
Chen, Tien-Yu
Lin, Chun-Hung Richard
Chiu, I-Min
Development and validation of a deep learning pipeline to measure pericardial effusion in echocardiography
title Development and validation of a deep learning pipeline to measure pericardial effusion in echocardiography
title_full Development and validation of a deep learning pipeline to measure pericardial effusion in echocardiography
title_fullStr Development and validation of a deep learning pipeline to measure pericardial effusion in echocardiography
title_full_unstemmed Development and validation of a deep learning pipeline to measure pericardial effusion in echocardiography
title_short Development and validation of a deep learning pipeline to measure pericardial effusion in echocardiography
title_sort development and validation of a deep learning pipeline to measure pericardial effusion in echocardiography
topic Cardiovascular Medicine
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10436508/
https://www.ncbi.nlm.nih.gov/pubmed/37600054
http://dx.doi.org/10.3389/fcvm.2023.1195235
work_keys_str_mv AT chengchiyung developmentandvalidationofadeeplearningpipelinetomeasurepericardialeffusioninechocardiography
AT wuchengching developmentandvalidationofadeeplearningpipelinetomeasurepericardialeffusioninechocardiography
AT chenhuangchung developmentandvalidationofadeeplearningpipelinetomeasurepericardialeffusioninechocardiography
AT hungchunhui developmentandvalidationofadeeplearningpipelinetomeasurepericardialeffusioninechocardiography
AT chentienyu developmentandvalidationofadeeplearningpipelinetomeasurepericardialeffusioninechocardiography
AT linchunhungrichard developmentandvalidationofadeeplearningpipelinetomeasurepericardialeffusioninechocardiography
AT chiuimin developmentandvalidationofadeeplearningpipelinetomeasurepericardialeffusioninechocardiography