Cargando…
Secretome analysis revealed that cell wall remodeling and starch catabolism underlie the early stages of somatic embryogenesis in Pinus nigra
Somatic embryogenesis is an efficient mean for rapid micropropagation and preservation of the germplasm of valuable coniferous trees. Little is known about how the composition of secretome tracks down the level of embryogenic capacity. Unlike embryogenic tissue on solid medium, suspension cell cultu...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10436561/ https://www.ncbi.nlm.nih.gov/pubmed/37600183 http://dx.doi.org/10.3389/fpls.2023.1225424 |
_version_ | 1785092359120224256 |
---|---|
author | Pernis, Miroslav Salaj, Terézia Bellová, Jana Danchenko, Maksym Baráth, Peter Klubicová, Katarína |
author_facet | Pernis, Miroslav Salaj, Terézia Bellová, Jana Danchenko, Maksym Baráth, Peter Klubicová, Katarína |
author_sort | Pernis, Miroslav |
collection | PubMed |
description | Somatic embryogenesis is an efficient mean for rapid micropropagation and preservation of the germplasm of valuable coniferous trees. Little is known about how the composition of secretome tracks down the level of embryogenic capacity. Unlike embryogenic tissue on solid medium, suspension cell cultures enable the study of extracellular proteins secreted into a liquid cultivation medium, avoiding contamination from destructured cells. Here, we present proteomic data of the secretome of Pinus nigra cell lines with contrasting embryogenic capacity, accounting for variability between genotypes. Our results showed that cell wall-related and carbohydrate-acting proteins were the most differentially accumulated. Peroxidases, extensin, α-amylase, plant basic secretory family protein (BSP), and basic secretory protease (S) were more abundant in the medium from the lines with high embryogenic capacity. In contrast, the medium from the low embryogenic capacity cell lines contained a higher amount of polygalacturonases, hothead protein, and expansin, which are generally associated with cell wall loosening or softening. These results corroborated the microscopic findings in cell lines with low embryogenic capacity—long suspensor cells without proper assembly. Furthermore, proteomic data were subsequently validated by peroxidase and α-amylase activity assays, and hence, we conclude that both tested enzyme activities can be considered potential markers of high embryogenic capacity. |
format | Online Article Text |
id | pubmed-10436561 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-104365612023-08-19 Secretome analysis revealed that cell wall remodeling and starch catabolism underlie the early stages of somatic embryogenesis in Pinus nigra Pernis, Miroslav Salaj, Terézia Bellová, Jana Danchenko, Maksym Baráth, Peter Klubicová, Katarína Front Plant Sci Plant Science Somatic embryogenesis is an efficient mean for rapid micropropagation and preservation of the germplasm of valuable coniferous trees. Little is known about how the composition of secretome tracks down the level of embryogenic capacity. Unlike embryogenic tissue on solid medium, suspension cell cultures enable the study of extracellular proteins secreted into a liquid cultivation medium, avoiding contamination from destructured cells. Here, we present proteomic data of the secretome of Pinus nigra cell lines with contrasting embryogenic capacity, accounting for variability between genotypes. Our results showed that cell wall-related and carbohydrate-acting proteins were the most differentially accumulated. Peroxidases, extensin, α-amylase, plant basic secretory family protein (BSP), and basic secretory protease (S) were more abundant in the medium from the lines with high embryogenic capacity. In contrast, the medium from the low embryogenic capacity cell lines contained a higher amount of polygalacturonases, hothead protein, and expansin, which are generally associated with cell wall loosening or softening. These results corroborated the microscopic findings in cell lines with low embryogenic capacity—long suspensor cells without proper assembly. Furthermore, proteomic data were subsequently validated by peroxidase and α-amylase activity assays, and hence, we conclude that both tested enzyme activities can be considered potential markers of high embryogenic capacity. Frontiers Media S.A. 2023-08-04 /pmc/articles/PMC10436561/ /pubmed/37600183 http://dx.doi.org/10.3389/fpls.2023.1225424 Text en Copyright © 2023 Pernis, Salaj, Bellová, Danchenko, Baráth and Klubicová https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Plant Science Pernis, Miroslav Salaj, Terézia Bellová, Jana Danchenko, Maksym Baráth, Peter Klubicová, Katarína Secretome analysis revealed that cell wall remodeling and starch catabolism underlie the early stages of somatic embryogenesis in Pinus nigra |
title | Secretome analysis revealed that cell wall remodeling and starch catabolism underlie the early stages of somatic embryogenesis in Pinus nigra
|
title_full | Secretome analysis revealed that cell wall remodeling and starch catabolism underlie the early stages of somatic embryogenesis in Pinus nigra
|
title_fullStr | Secretome analysis revealed that cell wall remodeling and starch catabolism underlie the early stages of somatic embryogenesis in Pinus nigra
|
title_full_unstemmed | Secretome analysis revealed that cell wall remodeling and starch catabolism underlie the early stages of somatic embryogenesis in Pinus nigra
|
title_short | Secretome analysis revealed that cell wall remodeling and starch catabolism underlie the early stages of somatic embryogenesis in Pinus nigra
|
title_sort | secretome analysis revealed that cell wall remodeling and starch catabolism underlie the early stages of somatic embryogenesis in pinus nigra |
topic | Plant Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10436561/ https://www.ncbi.nlm.nih.gov/pubmed/37600183 http://dx.doi.org/10.3389/fpls.2023.1225424 |
work_keys_str_mv | AT pernismiroslav secretomeanalysisrevealedthatcellwallremodelingandstarchcatabolismunderlietheearlystagesofsomaticembryogenesisinpinusnigra AT salajterezia secretomeanalysisrevealedthatcellwallremodelingandstarchcatabolismunderlietheearlystagesofsomaticembryogenesisinpinusnigra AT bellovajana secretomeanalysisrevealedthatcellwallremodelingandstarchcatabolismunderlietheearlystagesofsomaticembryogenesisinpinusnigra AT danchenkomaksym secretomeanalysisrevealedthatcellwallremodelingandstarchcatabolismunderlietheearlystagesofsomaticembryogenesisinpinusnigra AT barathpeter secretomeanalysisrevealedthatcellwallremodelingandstarchcatabolismunderlietheearlystagesofsomaticembryogenesisinpinusnigra AT klubicovakatarina secretomeanalysisrevealedthatcellwallremodelingandstarchcatabolismunderlietheearlystagesofsomaticembryogenesisinpinusnigra |