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AVPCD: a plant-derived medicine database of antiviral phytochemicals for cancer, Covid-19, malaria and HIV

Serious illnesses caused by viruses are becoming the world’s most critical public health issues and lead millions of deaths each year in the world. Thousands of studies confirmed that the plant-derived medicines could play positive therapeutic effects on the patients with viral diseases. Since thous...

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Autores principales: Ullah, Shahid, Rahman, Wajeeha, Ullah, Farhan, Ullah, Anees, Ahmad, Gulzar, Ijaz, Muhammad, Ullah, Hameed, Zheng, Zilong, Gao, Tianshun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10437090/
https://www.ncbi.nlm.nih.gov/pubmed/37594855
http://dx.doi.org/10.1093/database/baad056
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author Ullah, Shahid
Rahman, Wajeeha
Ullah, Farhan
Ullah, Anees
Ahmad, Gulzar
Ijaz, Muhammad
Ullah, Hameed
Zheng, Zilong
Gao, Tianshun
author_facet Ullah, Shahid
Rahman, Wajeeha
Ullah, Farhan
Ullah, Anees
Ahmad, Gulzar
Ijaz, Muhammad
Ullah, Hameed
Zheng, Zilong
Gao, Tianshun
author_sort Ullah, Shahid
collection PubMed
description Serious illnesses caused by viruses are becoming the world’s most critical public health issues and lead millions of deaths each year in the world. Thousands of studies confirmed that the plant-derived medicines could play positive therapeutic effects on the patients with viral diseases. Since thousands of antiviral phytochemicals have been identified as lifesaving drugs in medical research, a comprehensive database is highly desirable to integrate the medicinal plants with their different medicinal properties. Therefore, we provided a friendly antiviral phytochemical database AVPCD covering 2537 antiviral phytochemicals from 383 medicinal compounds and 319 different families with annotation of their scientific, family and common names, along with the parts used, disease information, active compounds, links of relevant articles for COVID-19, cancer, HIV and malaria. Furthermore, each compound in AVPCD was annotated with its 2D and 3D structure, molecular formula, molecular weight, isomeric SMILES, InChI, InChI Key and IUPAC name and 21 other properties. Each compound was annotated with more than 20 properties. Specifically, a scoring method was designed to measure the confidence of each phytochemical for the viral diseases. In addition, we constructed a user-friendly platform with several powerful modules for searching and browsing the details of all phytochemicals. We believe this database will facilitate global researchers, drug developers and health practitioners in obtaining useful information against viral diseases.
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spelling pubmed-104370902023-08-19 AVPCD: a plant-derived medicine database of antiviral phytochemicals for cancer, Covid-19, malaria and HIV Ullah, Shahid Rahman, Wajeeha Ullah, Farhan Ullah, Anees Ahmad, Gulzar Ijaz, Muhammad Ullah, Hameed Zheng, Zilong Gao, Tianshun Database (Oxford) Database Tool Serious illnesses caused by viruses are becoming the world’s most critical public health issues and lead millions of deaths each year in the world. Thousands of studies confirmed that the plant-derived medicines could play positive therapeutic effects on the patients with viral diseases. Since thousands of antiviral phytochemicals have been identified as lifesaving drugs in medical research, a comprehensive database is highly desirable to integrate the medicinal plants with their different medicinal properties. Therefore, we provided a friendly antiviral phytochemical database AVPCD covering 2537 antiviral phytochemicals from 383 medicinal compounds and 319 different families with annotation of their scientific, family and common names, along with the parts used, disease information, active compounds, links of relevant articles for COVID-19, cancer, HIV and malaria. Furthermore, each compound in AVPCD was annotated with its 2D and 3D structure, molecular formula, molecular weight, isomeric SMILES, InChI, InChI Key and IUPAC name and 21 other properties. Each compound was annotated with more than 20 properties. Specifically, a scoring method was designed to measure the confidence of each phytochemical for the viral diseases. In addition, we constructed a user-friendly platform with several powerful modules for searching and browsing the details of all phytochemicals. We believe this database will facilitate global researchers, drug developers and health practitioners in obtaining useful information against viral diseases. Oxford University Press 2023-08-18 /pmc/articles/PMC10437090/ /pubmed/37594855 http://dx.doi.org/10.1093/database/baad056 Text en © The Author(s) 2023. Published by Oxford University Press. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Database Tool
Ullah, Shahid
Rahman, Wajeeha
Ullah, Farhan
Ullah, Anees
Ahmad, Gulzar
Ijaz, Muhammad
Ullah, Hameed
Zheng, Zilong
Gao, Tianshun
AVPCD: a plant-derived medicine database of antiviral phytochemicals for cancer, Covid-19, malaria and HIV
title AVPCD: a plant-derived medicine database of antiviral phytochemicals for cancer, Covid-19, malaria and HIV
title_full AVPCD: a plant-derived medicine database of antiviral phytochemicals for cancer, Covid-19, malaria and HIV
title_fullStr AVPCD: a plant-derived medicine database of antiviral phytochemicals for cancer, Covid-19, malaria and HIV
title_full_unstemmed AVPCD: a plant-derived medicine database of antiviral phytochemicals for cancer, Covid-19, malaria and HIV
title_short AVPCD: a plant-derived medicine database of antiviral phytochemicals for cancer, Covid-19, malaria and HIV
title_sort avpcd: a plant-derived medicine database of antiviral phytochemicals for cancer, covid-19, malaria and hiv
topic Database Tool
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10437090/
https://www.ncbi.nlm.nih.gov/pubmed/37594855
http://dx.doi.org/10.1093/database/baad056
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