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The role of pyroptosis-related lncRNA risk signature in ovarian cancer prognosis and immune system
Ovarian cancer is a leading cause of death in females with gynecologic cancers. Pyroptosis is a relatively new discovered programmed cell death that is believed to be associated with inflammation. However, studies on pyroptosis-related lncRNAs in ovarian cancer are limited. In this study, we identif...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer US
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10439870/ https://www.ncbi.nlm.nih.gov/pubmed/37597098 http://dx.doi.org/10.1007/s12672-023-00767-3 |
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author | Wu, Yanling Liang, Lei Li, Qin Shu, Lilu Wang, Peter Huang, Shufeng |
author_facet | Wu, Yanling Liang, Lei Li, Qin Shu, Lilu Wang, Peter Huang, Shufeng |
author_sort | Wu, Yanling |
collection | PubMed |
description | Ovarian cancer is a leading cause of death in females with gynecologic cancers. Pyroptosis is a relatively new discovered programmed cell death that is believed to be associated with inflammation. However, studies on pyroptosis-related lncRNAs in ovarian cancer are limited. In this study, we identified 29 pyroptosis-related genes and screened out 72 pyroptosis-related lncRNAs. Furthermore, the 72 lncRNAs were eliminated to 2 survival-related lncRNAs using Cox regression and Lasso regression to build an ovarian cancer prognostic prediction signature and were further validated on the test set. We adopted a riskscore from the two-gene signature, and the survival in low-risk group was higher than the high-risk group. Functional enrichment analysis indicated that the differentially expressed genes (DEGs) between two risk groups were associated with tumor immunity. This study implies that pyroptosis-related genes are closely related to tumor immunity and could be potential therapeutic factors for ovarian cancer treatment. |
format | Online Article Text |
id | pubmed-10439870 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Springer US |
record_format | MEDLINE/PubMed |
spelling | pubmed-104398702023-08-21 The role of pyroptosis-related lncRNA risk signature in ovarian cancer prognosis and immune system Wu, Yanling Liang, Lei Li, Qin Shu, Lilu Wang, Peter Huang, Shufeng Discov Oncol Research Ovarian cancer is a leading cause of death in females with gynecologic cancers. Pyroptosis is a relatively new discovered programmed cell death that is believed to be associated with inflammation. However, studies on pyroptosis-related lncRNAs in ovarian cancer are limited. In this study, we identified 29 pyroptosis-related genes and screened out 72 pyroptosis-related lncRNAs. Furthermore, the 72 lncRNAs were eliminated to 2 survival-related lncRNAs using Cox regression and Lasso regression to build an ovarian cancer prognostic prediction signature and were further validated on the test set. We adopted a riskscore from the two-gene signature, and the survival in low-risk group was higher than the high-risk group. Functional enrichment analysis indicated that the differentially expressed genes (DEGs) between two risk groups were associated with tumor immunity. This study implies that pyroptosis-related genes are closely related to tumor immunity and could be potential therapeutic factors for ovarian cancer treatment. Springer US 2023-08-19 /pmc/articles/PMC10439870/ /pubmed/37597098 http://dx.doi.org/10.1007/s12672-023-00767-3 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Research Wu, Yanling Liang, Lei Li, Qin Shu, Lilu Wang, Peter Huang, Shufeng The role of pyroptosis-related lncRNA risk signature in ovarian cancer prognosis and immune system |
title | The role of pyroptosis-related lncRNA risk signature in ovarian cancer prognosis and immune system |
title_full | The role of pyroptosis-related lncRNA risk signature in ovarian cancer prognosis and immune system |
title_fullStr | The role of pyroptosis-related lncRNA risk signature in ovarian cancer prognosis and immune system |
title_full_unstemmed | The role of pyroptosis-related lncRNA risk signature in ovarian cancer prognosis and immune system |
title_short | The role of pyroptosis-related lncRNA risk signature in ovarian cancer prognosis and immune system |
title_sort | role of pyroptosis-related lncrna risk signature in ovarian cancer prognosis and immune system |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10439870/ https://www.ncbi.nlm.nih.gov/pubmed/37597098 http://dx.doi.org/10.1007/s12672-023-00767-3 |
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