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Remote regulation of rs80245547 and rs72673891 mediated by transcription factors C-Jun and CREB1 affect GSTCD expression
Chronic obstructive pulmonary disease (COPD), the third leading cause of death worldwide, is influenced by genetic factors. The genetic signal rs10516526 in the glutathione S-transferase C-terminal domain containing (GSTCD) gene is a highly significant and reproducible signal associated with lung fu...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10440715/ https://www.ncbi.nlm.nih.gov/pubmed/37609638 http://dx.doi.org/10.1016/j.isci.2023.107383 |
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author | Li, Jin-Xiu Huang, Xue-Zhen Fu, Wei-ping Zhang, Xiao-hua Mauki, David H. Zhang, Jing Sun, Chang Dai, Lu-Ming Zhong, Li Yu, Li Zhang, Ya-ping |
author_facet | Li, Jin-Xiu Huang, Xue-Zhen Fu, Wei-ping Zhang, Xiao-hua Mauki, David H. Zhang, Jing Sun, Chang Dai, Lu-Ming Zhong, Li Yu, Li Zhang, Ya-ping |
author_sort | Li, Jin-Xiu |
collection | PubMed |
description | Chronic obstructive pulmonary disease (COPD), the third leading cause of death worldwide, is influenced by genetic factors. The genetic signal rs10516526 in the glutathione S-transferase C-terminal domain containing (GSTCD) gene is a highly significant and reproducible signal associated with lung function and COPD on chromosome 4q24. In this study, comprehensive bioinformatics analyses and experimental verifications were detailly implemented to explore the regulation mechanism of rs10516526 and GSTCD in COPD. The results suggested that low expression of GSTCD was associated with COPD (p = 0.010). And C-Jun and CREB1 transcription factors were found to be essential for the regulation of GSTCD by rs80245547 and rs72673891. Moreover, rs80245547T and rs72673891G had a stronger binding ability to these transcription factors, which may promote the allele-specific long-range enhancer-promoter interactions on GSTCD, thus making COPD less susceptible. Our study provides a new insight into the relationship between rs10516526, GSTCD, and COPD. |
format | Online Article Text |
id | pubmed-10440715 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-104407152023-08-22 Remote regulation of rs80245547 and rs72673891 mediated by transcription factors C-Jun and CREB1 affect GSTCD expression Li, Jin-Xiu Huang, Xue-Zhen Fu, Wei-ping Zhang, Xiao-hua Mauki, David H. Zhang, Jing Sun, Chang Dai, Lu-Ming Zhong, Li Yu, Li Zhang, Ya-ping iScience Article Chronic obstructive pulmonary disease (COPD), the third leading cause of death worldwide, is influenced by genetic factors. The genetic signal rs10516526 in the glutathione S-transferase C-terminal domain containing (GSTCD) gene is a highly significant and reproducible signal associated with lung function and COPD on chromosome 4q24. In this study, comprehensive bioinformatics analyses and experimental verifications were detailly implemented to explore the regulation mechanism of rs10516526 and GSTCD in COPD. The results suggested that low expression of GSTCD was associated with COPD (p = 0.010). And C-Jun and CREB1 transcription factors were found to be essential for the regulation of GSTCD by rs80245547 and rs72673891. Moreover, rs80245547T and rs72673891G had a stronger binding ability to these transcription factors, which may promote the allele-specific long-range enhancer-promoter interactions on GSTCD, thus making COPD less susceptible. Our study provides a new insight into the relationship between rs10516526, GSTCD, and COPD. Elsevier 2023-07-31 /pmc/articles/PMC10440715/ /pubmed/37609638 http://dx.doi.org/10.1016/j.isci.2023.107383 Text en © 2023 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Article Li, Jin-Xiu Huang, Xue-Zhen Fu, Wei-ping Zhang, Xiao-hua Mauki, David H. Zhang, Jing Sun, Chang Dai, Lu-Ming Zhong, Li Yu, Li Zhang, Ya-ping Remote regulation of rs80245547 and rs72673891 mediated by transcription factors C-Jun and CREB1 affect GSTCD expression |
title | Remote regulation of rs80245547 and rs72673891 mediated by transcription factors C-Jun and CREB1 affect GSTCD expression |
title_full | Remote regulation of rs80245547 and rs72673891 mediated by transcription factors C-Jun and CREB1 affect GSTCD expression |
title_fullStr | Remote regulation of rs80245547 and rs72673891 mediated by transcription factors C-Jun and CREB1 affect GSTCD expression |
title_full_unstemmed | Remote regulation of rs80245547 and rs72673891 mediated by transcription factors C-Jun and CREB1 affect GSTCD expression |
title_short | Remote regulation of rs80245547 and rs72673891 mediated by transcription factors C-Jun and CREB1 affect GSTCD expression |
title_sort | remote regulation of rs80245547 and rs72673891 mediated by transcription factors c-jun and creb1 affect gstcd expression |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10440715/ https://www.ncbi.nlm.nih.gov/pubmed/37609638 http://dx.doi.org/10.1016/j.isci.2023.107383 |
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