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Remote regulation of rs80245547 and rs72673891 mediated by transcription factors C-Jun and CREB1 affect GSTCD expression

Chronic obstructive pulmonary disease (COPD), the third leading cause of death worldwide, is influenced by genetic factors. The genetic signal rs10516526 in the glutathione S-transferase C-terminal domain containing (GSTCD) gene is a highly significant and reproducible signal associated with lung fu...

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Autores principales: Li, Jin-Xiu, Huang, Xue-Zhen, Fu, Wei-ping, Zhang, Xiao-hua, Mauki, David H., Zhang, Jing, Sun, Chang, Dai, Lu-Ming, Zhong, Li, Yu, Li, Zhang, Ya-ping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10440715/
https://www.ncbi.nlm.nih.gov/pubmed/37609638
http://dx.doi.org/10.1016/j.isci.2023.107383
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author Li, Jin-Xiu
Huang, Xue-Zhen
Fu, Wei-ping
Zhang, Xiao-hua
Mauki, David H.
Zhang, Jing
Sun, Chang
Dai, Lu-Ming
Zhong, Li
Yu, Li
Zhang, Ya-ping
author_facet Li, Jin-Xiu
Huang, Xue-Zhen
Fu, Wei-ping
Zhang, Xiao-hua
Mauki, David H.
Zhang, Jing
Sun, Chang
Dai, Lu-Ming
Zhong, Li
Yu, Li
Zhang, Ya-ping
author_sort Li, Jin-Xiu
collection PubMed
description Chronic obstructive pulmonary disease (COPD), the third leading cause of death worldwide, is influenced by genetic factors. The genetic signal rs10516526 in the glutathione S-transferase C-terminal domain containing (GSTCD) gene is a highly significant and reproducible signal associated with lung function and COPD on chromosome 4q24. In this study, comprehensive bioinformatics analyses and experimental verifications were detailly implemented to explore the regulation mechanism of rs10516526 and GSTCD in COPD. The results suggested that low expression of GSTCD was associated with COPD (p = 0.010). And C-Jun and CREB1 transcription factors were found to be essential for the regulation of GSTCD by rs80245547 and rs72673891. Moreover, rs80245547T and rs72673891G had a stronger binding ability to these transcription factors, which may promote the allele-specific long-range enhancer-promoter interactions on GSTCD, thus making COPD less susceptible. Our study provides a new insight into the relationship between rs10516526, GSTCD, and COPD.
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spelling pubmed-104407152023-08-22 Remote regulation of rs80245547 and rs72673891 mediated by transcription factors C-Jun and CREB1 affect GSTCD expression Li, Jin-Xiu Huang, Xue-Zhen Fu, Wei-ping Zhang, Xiao-hua Mauki, David H. Zhang, Jing Sun, Chang Dai, Lu-Ming Zhong, Li Yu, Li Zhang, Ya-ping iScience Article Chronic obstructive pulmonary disease (COPD), the third leading cause of death worldwide, is influenced by genetic factors. The genetic signal rs10516526 in the glutathione S-transferase C-terminal domain containing (GSTCD) gene is a highly significant and reproducible signal associated with lung function and COPD on chromosome 4q24. In this study, comprehensive bioinformatics analyses and experimental verifications were detailly implemented to explore the regulation mechanism of rs10516526 and GSTCD in COPD. The results suggested that low expression of GSTCD was associated with COPD (p = 0.010). And C-Jun and CREB1 transcription factors were found to be essential for the regulation of GSTCD by rs80245547 and rs72673891. Moreover, rs80245547T and rs72673891G had a stronger binding ability to these transcription factors, which may promote the allele-specific long-range enhancer-promoter interactions on GSTCD, thus making COPD less susceptible. Our study provides a new insight into the relationship between rs10516526, GSTCD, and COPD. Elsevier 2023-07-31 /pmc/articles/PMC10440715/ /pubmed/37609638 http://dx.doi.org/10.1016/j.isci.2023.107383 Text en © 2023 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Li, Jin-Xiu
Huang, Xue-Zhen
Fu, Wei-ping
Zhang, Xiao-hua
Mauki, David H.
Zhang, Jing
Sun, Chang
Dai, Lu-Ming
Zhong, Li
Yu, Li
Zhang, Ya-ping
Remote regulation of rs80245547 and rs72673891 mediated by transcription factors C-Jun and CREB1 affect GSTCD expression
title Remote regulation of rs80245547 and rs72673891 mediated by transcription factors C-Jun and CREB1 affect GSTCD expression
title_full Remote regulation of rs80245547 and rs72673891 mediated by transcription factors C-Jun and CREB1 affect GSTCD expression
title_fullStr Remote regulation of rs80245547 and rs72673891 mediated by transcription factors C-Jun and CREB1 affect GSTCD expression
title_full_unstemmed Remote regulation of rs80245547 and rs72673891 mediated by transcription factors C-Jun and CREB1 affect GSTCD expression
title_short Remote regulation of rs80245547 and rs72673891 mediated by transcription factors C-Jun and CREB1 affect GSTCD expression
title_sort remote regulation of rs80245547 and rs72673891 mediated by transcription factors c-jun and creb1 affect gstcd expression
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10440715/
https://www.ncbi.nlm.nih.gov/pubmed/37609638
http://dx.doi.org/10.1016/j.isci.2023.107383
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