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A novel collaborative self-supervised learning method for radiomic data

The computer-aided disease diagnosis from radiomic data is important in many medical applications. However, developing such a technique relies on labeling radiological images, which is a time-consuming, labor-intensive, and expensive process. In this work, we present the first novel collaborative se...

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Autores principales: Li, Zhiyuan, Li, Hailong, Ralescu, Anca L., Dillman, Jonathan R., Parikh, Nehal A., He, Lili
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10440826/
https://www.ncbi.nlm.nih.gov/pubmed/37321358
http://dx.doi.org/10.1016/j.neuroimage.2023.120229
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author Li, Zhiyuan
Li, Hailong
Ralescu, Anca L.
Dillman, Jonathan R.
Parikh, Nehal A.
He, Lili
author_facet Li, Zhiyuan
Li, Hailong
Ralescu, Anca L.
Dillman, Jonathan R.
Parikh, Nehal A.
He, Lili
author_sort Li, Zhiyuan
collection PubMed
description The computer-aided disease diagnosis from radiomic data is important in many medical applications. However, developing such a technique relies on labeling radiological images, which is a time-consuming, labor-intensive, and expensive process. In this work, we present the first novel collaborative self-supervised learning method to solve the challenge of insufficient labeled radiomic data, whose characteristics are different from text and image data. To achieve this, we present two collaborative pretext tasks that explore the latent pathological or biological relationships between regions of interest and the similarity and dissimilarity of information between subjects. Our method collaboratively learns the robust latent feature representations from radiomic data in a self-supervised manner to reduce human annotation efforts, which benefits the disease diagnosis. We compared our proposed method with other state-of-the-art self-supervised learning methods on a simulation study and two independent datasets. Extensive experimental results demonstrated that our method outperforms other self-supervised learning methods on both classification and regression tasks. With further refinement, our method will have the potential advantage in automatic disease diagnosis with large-scale unlabeled data available.
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spelling pubmed-104408262023-08-21 A novel collaborative self-supervised learning method for radiomic data Li, Zhiyuan Li, Hailong Ralescu, Anca L. Dillman, Jonathan R. Parikh, Nehal A. He, Lili Neuroimage Article The computer-aided disease diagnosis from radiomic data is important in many medical applications. However, developing such a technique relies on labeling radiological images, which is a time-consuming, labor-intensive, and expensive process. In this work, we present the first novel collaborative self-supervised learning method to solve the challenge of insufficient labeled radiomic data, whose characteristics are different from text and image data. To achieve this, we present two collaborative pretext tasks that explore the latent pathological or biological relationships between regions of interest and the similarity and dissimilarity of information between subjects. Our method collaboratively learns the robust latent feature representations from radiomic data in a self-supervised manner to reduce human annotation efforts, which benefits the disease diagnosis. We compared our proposed method with other state-of-the-art self-supervised learning methods on a simulation study and two independent datasets. Extensive experimental results demonstrated that our method outperforms other self-supervised learning methods on both classification and regression tasks. With further refinement, our method will have the potential advantage in automatic disease diagnosis with large-scale unlabeled data available. 2023-08-15 2023-06-14 /pmc/articles/PMC10440826/ /pubmed/37321358 http://dx.doi.org/10.1016/j.neuroimage.2023.120229 Text en https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) )
spellingShingle Article
Li, Zhiyuan
Li, Hailong
Ralescu, Anca L.
Dillman, Jonathan R.
Parikh, Nehal A.
He, Lili
A novel collaborative self-supervised learning method for radiomic data
title A novel collaborative self-supervised learning method for radiomic data
title_full A novel collaborative self-supervised learning method for radiomic data
title_fullStr A novel collaborative self-supervised learning method for radiomic data
title_full_unstemmed A novel collaborative self-supervised learning method for radiomic data
title_short A novel collaborative self-supervised learning method for radiomic data
title_sort novel collaborative self-supervised learning method for radiomic data
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10440826/
https://www.ncbi.nlm.nih.gov/pubmed/37321358
http://dx.doi.org/10.1016/j.neuroimage.2023.120229
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