Cargando…
THAPBI PICT—a fast, cautious, and accurate metabarcoding analysis pipeline
THAPBI PICT is an open source software pipeline for metabarcoding analysis of Illumina paired-end reads, including cases of multiplexing where more than one amplicon is amplified per DNA sample. Initially a Phytophthora ITS1 Classification Tool (PICT), we demonstrate using worked examples with our o...
Autores principales: | Cock, Peter J. A., Cooke, David E. L., Thorpe, Peter, Pritchard, Leighton |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10441533/ https://www.ncbi.nlm.nih.gov/pubmed/37609440 http://dx.doi.org/10.7717/peerj.15648 |
Ejemplares similares
-
Oomycete metabarcoding reveals the presence of Lagenidium spp. in phytotelmata
por: Leoro-Garzon, Paula, et al.
Publicado: (2019) -
Unearthing soil arthropod diversity through DNA metabarcoding
por: Young, Monica R., et al.
Publicado: (2022) -
Environmental DNA metabarcoding for monitoring metazoan biodiversity in Antarctic nearshore ecosystems
por: Clarke, Laurence J., et al.
Publicado: (2021) -
The effects of spatial and temporal replicate sampling on eDNA metabarcoding
por: Beentjes, Kevin K., et al.
Publicado: (2019) -
A bright idea—metabarcoding arthropods from light fixtures
por: Elbrecht, Vasco, et al.
Publicado: (2021)