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Mining the contribution of intensive care clinical course to outcome after traumatic brain injury
Existing methods to characterise the evolving condition of traumatic brain injury (TBI) patients in the intensive care unit (ICU) do not capture the context necessary for individualising treatment. Here, we integrate all heterogenous data stored in medical records (1166 pre-ICU and ICU variables) to...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10442346/ https://www.ncbi.nlm.nih.gov/pubmed/37604980 http://dx.doi.org/10.1038/s41746-023-00895-8 |
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author | Bhattacharyay, Shubhayu Caruso, Pier Francesco Åkerlund, Cecilia Wilson, Lindsay Stevens, Robert D. Menon, David K. Steyerberg, Ewout W. Nelson, David W. Ercole, Ari |
author_facet | Bhattacharyay, Shubhayu Caruso, Pier Francesco Åkerlund, Cecilia Wilson, Lindsay Stevens, Robert D. Menon, David K. Steyerberg, Ewout W. Nelson, David W. Ercole, Ari |
author_sort | Bhattacharyay, Shubhayu |
collection | PubMed |
description | Existing methods to characterise the evolving condition of traumatic brain injury (TBI) patients in the intensive care unit (ICU) do not capture the context necessary for individualising treatment. Here, we integrate all heterogenous data stored in medical records (1166 pre-ICU and ICU variables) to model the individualised contribution of clinical course to 6-month functional outcome on the Glasgow Outcome Scale -Extended (GOSE). On a prospective cohort (n = 1550, 65 centres) of TBI patients, we train recurrent neural network models to map a token-embedded time series representation of all variables (including missing values) to an ordinal GOSE prognosis every 2 h. The full range of variables explains up to 52% (95% CI: 50–54%) of the ordinal variance in functional outcome. Up to 91% (95% CI: 90–91%) of this explanation is derived from pre-ICU and admission information (i.e., static variables). Information collected in the ICU (i.e., dynamic variables) increases explanation (by up to 5% [95% CI: 4–6%]), though not enough to counter poorer overall performance in longer-stay (>5.75 days) patients. Highest-contributing variables include physician-based prognoses, CT features, and markers of neurological function. Whilst static information currently accounts for the majority of functional outcome explanation after TBI, data-driven analysis highlights investigative avenues to improve the dynamic characterisation of longer-stay patients. Moreover, our modelling strategy proves useful for converting large patient records into interpretable time series with missing data integration and minimal processing. |
format | Online Article Text |
id | pubmed-10442346 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-104423462023-08-23 Mining the contribution of intensive care clinical course to outcome after traumatic brain injury Bhattacharyay, Shubhayu Caruso, Pier Francesco Åkerlund, Cecilia Wilson, Lindsay Stevens, Robert D. Menon, David K. Steyerberg, Ewout W. Nelson, David W. Ercole, Ari NPJ Digit Med Article Existing methods to characterise the evolving condition of traumatic brain injury (TBI) patients in the intensive care unit (ICU) do not capture the context necessary for individualising treatment. Here, we integrate all heterogenous data stored in medical records (1166 pre-ICU and ICU variables) to model the individualised contribution of clinical course to 6-month functional outcome on the Glasgow Outcome Scale -Extended (GOSE). On a prospective cohort (n = 1550, 65 centres) of TBI patients, we train recurrent neural network models to map a token-embedded time series representation of all variables (including missing values) to an ordinal GOSE prognosis every 2 h. The full range of variables explains up to 52% (95% CI: 50–54%) of the ordinal variance in functional outcome. Up to 91% (95% CI: 90–91%) of this explanation is derived from pre-ICU and admission information (i.e., static variables). Information collected in the ICU (i.e., dynamic variables) increases explanation (by up to 5% [95% CI: 4–6%]), though not enough to counter poorer overall performance in longer-stay (>5.75 days) patients. Highest-contributing variables include physician-based prognoses, CT features, and markers of neurological function. Whilst static information currently accounts for the majority of functional outcome explanation after TBI, data-driven analysis highlights investigative avenues to improve the dynamic characterisation of longer-stay patients. Moreover, our modelling strategy proves useful for converting large patient records into interpretable time series with missing data integration and minimal processing. Nature Publishing Group UK 2023-08-21 /pmc/articles/PMC10442346/ /pubmed/37604980 http://dx.doi.org/10.1038/s41746-023-00895-8 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Bhattacharyay, Shubhayu Caruso, Pier Francesco Åkerlund, Cecilia Wilson, Lindsay Stevens, Robert D. Menon, David K. Steyerberg, Ewout W. Nelson, David W. Ercole, Ari Mining the contribution of intensive care clinical course to outcome after traumatic brain injury |
title | Mining the contribution of intensive care clinical course to outcome after traumatic brain injury |
title_full | Mining the contribution of intensive care clinical course to outcome after traumatic brain injury |
title_fullStr | Mining the contribution of intensive care clinical course to outcome after traumatic brain injury |
title_full_unstemmed | Mining the contribution of intensive care clinical course to outcome after traumatic brain injury |
title_short | Mining the contribution of intensive care clinical course to outcome after traumatic brain injury |
title_sort | mining the contribution of intensive care clinical course to outcome after traumatic brain injury |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10442346/ https://www.ncbi.nlm.nih.gov/pubmed/37604980 http://dx.doi.org/10.1038/s41746-023-00895-8 |
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