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Allosteric control of olefin isomerization kinetics via remote metal binding and its mechanochemical analysis

Allosteric control of reaction thermodynamics is well understood, but the mechanisms by which changes in local geometries of receptor sites lower activation reaction barriers in electronically uncoupled, remote reaction moieties remain relatively unexplored. Here we report a molecular scaffold in wh...

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Autores principales: Yu, Yichen, O’Neill, Robert T., Boulatov, Roman, Widenhoefer, Ross A., Craig, Stephen L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10442431/
https://www.ncbi.nlm.nih.gov/pubmed/37604905
http://dx.doi.org/10.1038/s41467-023-40842-5
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author Yu, Yichen
O’Neill, Robert T.
Boulatov, Roman
Widenhoefer, Ross A.
Craig, Stephen L.
author_facet Yu, Yichen
O’Neill, Robert T.
Boulatov, Roman
Widenhoefer, Ross A.
Craig, Stephen L.
author_sort Yu, Yichen
collection PubMed
description Allosteric control of reaction thermodynamics is well understood, but the mechanisms by which changes in local geometries of receptor sites lower activation reaction barriers in electronically uncoupled, remote reaction moieties remain relatively unexplored. Here we report a molecular scaffold in which the rate of thermal E-to-Z isomerization of an alkene increases by a factor of as much as 10(4) in response to fast binding of a metal ion to a remote receptor site. A mechanochemical model of the olefin coupled to a compressive harmonic spring reproduces the observed acceleration quantitatively, adding the studied isomerization to the very few reactions demonstrated to be sensitive to extrinsic compressive force. The work validates experimentally the generalization of mechanochemical kinetics to compressive loads and demonstrates that the formalism of force-coupled reactivity offers a productive framework for the quantitative analysis of the molecular basis of allosteric control of reaction kinetics. Important differences in the effects of compressive vs. tensile force on the kinetic stabilities of molecules are discussed.
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spelling pubmed-104424312023-08-23 Allosteric control of olefin isomerization kinetics via remote metal binding and its mechanochemical analysis Yu, Yichen O’Neill, Robert T. Boulatov, Roman Widenhoefer, Ross A. Craig, Stephen L. Nat Commun Article Allosteric control of reaction thermodynamics is well understood, but the mechanisms by which changes in local geometries of receptor sites lower activation reaction barriers in electronically uncoupled, remote reaction moieties remain relatively unexplored. Here we report a molecular scaffold in which the rate of thermal E-to-Z isomerization of an alkene increases by a factor of as much as 10(4) in response to fast binding of a metal ion to a remote receptor site. A mechanochemical model of the olefin coupled to a compressive harmonic spring reproduces the observed acceleration quantitatively, adding the studied isomerization to the very few reactions demonstrated to be sensitive to extrinsic compressive force. The work validates experimentally the generalization of mechanochemical kinetics to compressive loads and demonstrates that the formalism of force-coupled reactivity offers a productive framework for the quantitative analysis of the molecular basis of allosteric control of reaction kinetics. Important differences in the effects of compressive vs. tensile force on the kinetic stabilities of molecules are discussed. Nature Publishing Group UK 2023-08-21 /pmc/articles/PMC10442431/ /pubmed/37604905 http://dx.doi.org/10.1038/s41467-023-40842-5 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Yu, Yichen
O’Neill, Robert T.
Boulatov, Roman
Widenhoefer, Ross A.
Craig, Stephen L.
Allosteric control of olefin isomerization kinetics via remote metal binding and its mechanochemical analysis
title Allosteric control of olefin isomerization kinetics via remote metal binding and its mechanochemical analysis
title_full Allosteric control of olefin isomerization kinetics via remote metal binding and its mechanochemical analysis
title_fullStr Allosteric control of olefin isomerization kinetics via remote metal binding and its mechanochemical analysis
title_full_unstemmed Allosteric control of olefin isomerization kinetics via remote metal binding and its mechanochemical analysis
title_short Allosteric control of olefin isomerization kinetics via remote metal binding and its mechanochemical analysis
title_sort allosteric control of olefin isomerization kinetics via remote metal binding and its mechanochemical analysis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10442431/
https://www.ncbi.nlm.nih.gov/pubmed/37604905
http://dx.doi.org/10.1038/s41467-023-40842-5
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