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Experimental and Theoretical Exploration of the Kinetics and Thermodynamics of the Nucleophile-Induced Fragmentation of Ylidenenorbornadiene Carboxylates
[Image: see text] Ylidenenorbornadienes (YNDs), prepared by [4 + 2] cycloadditions between fulvenes and acetylene carboxylates, react with thiol nucleophiles to yield mixtures of four to eight diastereomers depending on the symmetry of the YND substrate. The mixtures of diastereomers fragment via a...
Autores principales: | , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10442913/ https://www.ncbi.nlm.nih.gov/pubmed/37535477 http://dx.doi.org/10.1021/acs.joc.3c00980 |
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author | Richardson, Abigail D. L’Heureux, Scott J. Henry, Ava M. McDonough, Elizabeth A. Fleischer, Cameron J. McMullen, Cameron C. Reynafarje, Trevor R. Guerrero, Gisele P. Williams, Quinn E. Zhou, Qingyang Malouf, David M. Thurman, Spencer E. Soeller, Julia E. Sheng, Jerry Y. Medhurst, Erica A. Canales, Angel E. Cecil, Ty B. Houk, K. N. Costanzo, Philip J. Bercovici, Daniel A. |
author_facet | Richardson, Abigail D. L’Heureux, Scott J. Henry, Ava M. McDonough, Elizabeth A. Fleischer, Cameron J. McMullen, Cameron C. Reynafarje, Trevor R. Guerrero, Gisele P. Williams, Quinn E. Zhou, Qingyang Malouf, David M. Thurman, Spencer E. Soeller, Julia E. Sheng, Jerry Y. Medhurst, Erica A. Canales, Angel E. Cecil, Ty B. Houk, K. N. Costanzo, Philip J. Bercovici, Daniel A. |
author_sort | Richardson, Abigail D. |
collection | PubMed |
description | [Image: see text] Ylidenenorbornadienes (YNDs), prepared by [4 + 2] cycloadditions between fulvenes and acetylene carboxylates, react with thiol nucleophiles to yield mixtures of four to eight diastereomers depending on the symmetry of the YND substrate. The mixtures of diastereomers fragment via a retro-[4 + 2] cycloaddition with a large variation in rate, with half-lives ranging from 16 to 11,000 min at 80 °C. The diastereomer-enriched samples of propane thiol adducts [YND-propanethiol (PTs)] were isolated and identified by nuclear Overhauser effect spectroscopy (NOESY) correlations. Simulated kinetics were used to extrapolate the rate constants of individual diastereomers from the observed rate data, and it correlated well with rate constants measured directly and from isolated diastereomer-enriched samples. The individual diastereomers of a model system fragment at differing rates with half-lives ranging from 5 to 44 min in CDCl(3). Density functional theory calculations were performed to investigate the mechanism of fragmentation and support an asynchronous retro-[4 + 2] cycloaddition transition state. The computations generally correlated well with the observed free energies of activation for four diastereomers of the model system as a whole, within 2.6 kcal/mol. However, the observed order of the fragmentation rates across the set of diastereomers deviated from the computational results. YNDs display wide variability in the rate of fragmentation, dependent on the stereoelectronics of the ylidene substituents. A Hammett study showed that the electron-rich aromatic rings attached to the ylidene bridge increase the fragmentation rate, while electron-deficient systems slow fragmentation rates. |
format | Online Article Text |
id | pubmed-10442913 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-104429132023-08-23 Experimental and Theoretical Exploration of the Kinetics and Thermodynamics of the Nucleophile-Induced Fragmentation of Ylidenenorbornadiene Carboxylates Richardson, Abigail D. L’Heureux, Scott J. Henry, Ava M. McDonough, Elizabeth A. Fleischer, Cameron J. McMullen, Cameron C. Reynafarje, Trevor R. Guerrero, Gisele P. Williams, Quinn E. Zhou, Qingyang Malouf, David M. Thurman, Spencer E. Soeller, Julia E. Sheng, Jerry Y. Medhurst, Erica A. Canales, Angel E. Cecil, Ty B. Houk, K. N. Costanzo, Philip J. Bercovici, Daniel A. J Org Chem [Image: see text] Ylidenenorbornadienes (YNDs), prepared by [4 + 2] cycloadditions between fulvenes and acetylene carboxylates, react with thiol nucleophiles to yield mixtures of four to eight diastereomers depending on the symmetry of the YND substrate. The mixtures of diastereomers fragment via a retro-[4 + 2] cycloaddition with a large variation in rate, with half-lives ranging from 16 to 11,000 min at 80 °C. The diastereomer-enriched samples of propane thiol adducts [YND-propanethiol (PTs)] were isolated and identified by nuclear Overhauser effect spectroscopy (NOESY) correlations. Simulated kinetics were used to extrapolate the rate constants of individual diastereomers from the observed rate data, and it correlated well with rate constants measured directly and from isolated diastereomer-enriched samples. The individual diastereomers of a model system fragment at differing rates with half-lives ranging from 5 to 44 min in CDCl(3). Density functional theory calculations were performed to investigate the mechanism of fragmentation and support an asynchronous retro-[4 + 2] cycloaddition transition state. The computations generally correlated well with the observed free energies of activation for four diastereomers of the model system as a whole, within 2.6 kcal/mol. However, the observed order of the fragmentation rates across the set of diastereomers deviated from the computational results. YNDs display wide variability in the rate of fragmentation, dependent on the stereoelectronics of the ylidene substituents. A Hammett study showed that the electron-rich aromatic rings attached to the ylidene bridge increase the fragmentation rate, while electron-deficient systems slow fragmentation rates. American Chemical Society 2023-08-03 /pmc/articles/PMC10442913/ /pubmed/37535477 http://dx.doi.org/10.1021/acs.joc.3c00980 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Richardson, Abigail D. L’Heureux, Scott J. Henry, Ava M. McDonough, Elizabeth A. Fleischer, Cameron J. McMullen, Cameron C. Reynafarje, Trevor R. Guerrero, Gisele P. Williams, Quinn E. Zhou, Qingyang Malouf, David M. Thurman, Spencer E. Soeller, Julia E. Sheng, Jerry Y. Medhurst, Erica A. Canales, Angel E. Cecil, Ty B. Houk, K. N. Costanzo, Philip J. Bercovici, Daniel A. Experimental and Theoretical Exploration of the Kinetics and Thermodynamics of the Nucleophile-Induced Fragmentation of Ylidenenorbornadiene Carboxylates |
title | Experimental and
Theoretical Exploration of the Kinetics
and Thermodynamics of the Nucleophile-Induced Fragmentation of Ylidenenorbornadiene
Carboxylates |
title_full | Experimental and
Theoretical Exploration of the Kinetics
and Thermodynamics of the Nucleophile-Induced Fragmentation of Ylidenenorbornadiene
Carboxylates |
title_fullStr | Experimental and
Theoretical Exploration of the Kinetics
and Thermodynamics of the Nucleophile-Induced Fragmentation of Ylidenenorbornadiene
Carboxylates |
title_full_unstemmed | Experimental and
Theoretical Exploration of the Kinetics
and Thermodynamics of the Nucleophile-Induced Fragmentation of Ylidenenorbornadiene
Carboxylates |
title_short | Experimental and
Theoretical Exploration of the Kinetics
and Thermodynamics of the Nucleophile-Induced Fragmentation of Ylidenenorbornadiene
Carboxylates |
title_sort | experimental and
theoretical exploration of the kinetics
and thermodynamics of the nucleophile-induced fragmentation of ylidenenorbornadiene
carboxylates |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10442913/ https://www.ncbi.nlm.nih.gov/pubmed/37535477 http://dx.doi.org/10.1021/acs.joc.3c00980 |
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