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The complete chloroplast genome of Malvaviscus penduliflorus (Malvaceae)

In this study, we assembled the complete chloroplast (cp) genome of Malvaviscus penduliflorus using high-throughput Illumina sequencing reads. The resulting plastome assembly displayed a typical quadripartite structure with a total length of 160,332 bp, containing a pair of inverted repeat regions (...

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Autores principales: Liu, Rong, Xie, Li, Wang, Dan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10443977/
https://www.ncbi.nlm.nih.gov/pubmed/37614528
http://dx.doi.org/10.1080/23802359.2023.2246670
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author Liu, Rong
Xie, Li
Wang, Dan
author_facet Liu, Rong
Xie, Li
Wang, Dan
author_sort Liu, Rong
collection PubMed
description In this study, we assembled the complete chloroplast (cp) genome of Malvaviscus penduliflorus using high-throughput Illumina sequencing reads. The resulting plastome assembly displayed a typical quadripartite structure with a total length of 160,332 bp, containing a pair of inverted repeat regions (IRs) of 26,313 bp separated by a large single-copy region (LSC) of 88,750 bp and a small single-copy region (SSC) of 18,956 bp. The M. penduliflorus cp genome contained 128 genes, and its overall GC content was 36.96%. Phylogenetic analysis among M. penduliflorus and five other Malvaceae species demonstrated that M. penduliflorus was closely related to Urena procumbens and Hibiscus cannabinus. The M. penduliflorus cp genome presented in this study will lay a good foundation for further genetic and genomic studies of the genus Malvaviscus as well as Malvaceae.
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spelling pubmed-104439772023-08-23 The complete chloroplast genome of Malvaviscus penduliflorus (Malvaceae) Liu, Rong Xie, Li Wang, Dan Mitochondrial DNA B Resour Plastome Report In this study, we assembled the complete chloroplast (cp) genome of Malvaviscus penduliflorus using high-throughput Illumina sequencing reads. The resulting plastome assembly displayed a typical quadripartite structure with a total length of 160,332 bp, containing a pair of inverted repeat regions (IRs) of 26,313 bp separated by a large single-copy region (LSC) of 88,750 bp and a small single-copy region (SSC) of 18,956 bp. The M. penduliflorus cp genome contained 128 genes, and its overall GC content was 36.96%. Phylogenetic analysis among M. penduliflorus and five other Malvaceae species demonstrated that M. penduliflorus was closely related to Urena procumbens and Hibiscus cannabinus. The M. penduliflorus cp genome presented in this study will lay a good foundation for further genetic and genomic studies of the genus Malvaviscus as well as Malvaceae. Taylor & Francis 2023-08-21 /pmc/articles/PMC10443977/ /pubmed/37614528 http://dx.doi.org/10.1080/23802359.2023.2246670 Text en © 2023 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. The terms on which this article has been published allow the posting of the Accepted Manuscript in a repository by the author(s) or with their consent.
spellingShingle Plastome Report
Liu, Rong
Xie, Li
Wang, Dan
The complete chloroplast genome of Malvaviscus penduliflorus (Malvaceae)
title The complete chloroplast genome of Malvaviscus penduliflorus (Malvaceae)
title_full The complete chloroplast genome of Malvaviscus penduliflorus (Malvaceae)
title_fullStr The complete chloroplast genome of Malvaviscus penduliflorus (Malvaceae)
title_full_unstemmed The complete chloroplast genome of Malvaviscus penduliflorus (Malvaceae)
title_short The complete chloroplast genome of Malvaviscus penduliflorus (Malvaceae)
title_sort complete chloroplast genome of malvaviscus penduliflorus (malvaceae)
topic Plastome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10443977/
https://www.ncbi.nlm.nih.gov/pubmed/37614528
http://dx.doi.org/10.1080/23802359.2023.2246670
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