Cargando…

Phylogeny-wide analysis of G-protein coupled receptors in social amoebas and implications for the evolution of multicellularity

G-protein coupled receptors (GPCRs) are seven-transmembrane proteins and constitute the largest group of receptors within eukaryotes. The presence of a large set of GPCRs in the unicellular Amoebozoa was surprising and is indicative of the largely undiscovered environmental sensing capabilities in t...

Descripción completa

Detalles Bibliográficos
Autores principales: Hall, Grant, Kelly, Sarah, Schaap, Pauline, Schilde, Christina
Formato: Online Artículo Texto
Lenguaje:English
Publicado: F1000 Research Limited 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10445921/
https://www.ncbi.nlm.nih.gov/pubmed/37645274
http://dx.doi.org/10.12688/openreseurope.15250.2
_version_ 1785094289050566656
author Hall, Grant
Kelly, Sarah
Schaap, Pauline
Schilde, Christina
author_facet Hall, Grant
Kelly, Sarah
Schaap, Pauline
Schilde, Christina
author_sort Hall, Grant
collection PubMed
description G-protein coupled receptors (GPCRs) are seven-transmembrane proteins and constitute the largest group of receptors within eukaryotes. The presence of a large set of GPCRs in the unicellular Amoebozoa was surprising and is indicative of the largely undiscovered environmental sensing capabilities in this group. Evolutionary transitions from unicellular to multicellular lifestyles, like we see in social amoebas, have occurred several times independently in the Amoebozoa, and GPCRs may have been co-opted for new functions in cell-cell communication. Methods We have analysed a set of GPCRs from fully sequenced Amoebozoan genomes by Bayesian inference, compared their phylogenetic distribution and domain composition, and analysed their temporal and spatial expression patterns in five species of dictyostelids. Results We found evidence that most GPCRs are conserved deeply in the Amoebozoa and are probably performing roles in general cell functions and complex environmental sensing. All families of GPCRs (apart from the family 4 fungal pheromone receptors) are present in dictyostelids with family 5 being the largest and family 2 the one with the fewest members. For the first time, we identify the presence of family 1 rhodopsin-like GPCRs in dictyostelids. Some GPCRs have been amplified in the dictyostelids and in specific lineages thereof and through changes in expression patterns may have been repurposed for signalling in multicellular development. Discussion Our phylogenetic analysis suggests that GPCR families 1, 2 and 6 already diverged early in the Amoebozoa, whereas families 3 and 5 expanded later within the dictyostelids. The family 6 cAMP receptors that have experimentally supported roles in multicellular development in dictyostelids ( carA-carD; tasA/B) originated at the root of all dictyostelids and only have weakly associated homologs in Physarum polycephalum. Our analysis identified candidate GPCRs which have evolved in the dictyostelids and could have been co-opted for multicellular development.
format Online
Article
Text
id pubmed-10445921
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher F1000 Research Limited
record_format MEDLINE/PubMed
spelling pubmed-104459212023-08-29 Phylogeny-wide analysis of G-protein coupled receptors in social amoebas and implications for the evolution of multicellularity Hall, Grant Kelly, Sarah Schaap, Pauline Schilde, Christina Open Res Eur Research Article G-protein coupled receptors (GPCRs) are seven-transmembrane proteins and constitute the largest group of receptors within eukaryotes. The presence of a large set of GPCRs in the unicellular Amoebozoa was surprising and is indicative of the largely undiscovered environmental sensing capabilities in this group. Evolutionary transitions from unicellular to multicellular lifestyles, like we see in social amoebas, have occurred several times independently in the Amoebozoa, and GPCRs may have been co-opted for new functions in cell-cell communication. Methods We have analysed a set of GPCRs from fully sequenced Amoebozoan genomes by Bayesian inference, compared their phylogenetic distribution and domain composition, and analysed their temporal and spatial expression patterns in five species of dictyostelids. Results We found evidence that most GPCRs are conserved deeply in the Amoebozoa and are probably performing roles in general cell functions and complex environmental sensing. All families of GPCRs (apart from the family 4 fungal pheromone receptors) are present in dictyostelids with family 5 being the largest and family 2 the one with the fewest members. For the first time, we identify the presence of family 1 rhodopsin-like GPCRs in dictyostelids. Some GPCRs have been amplified in the dictyostelids and in specific lineages thereof and through changes in expression patterns may have been repurposed for signalling in multicellular development. Discussion Our phylogenetic analysis suggests that GPCR families 1, 2 and 6 already diverged early in the Amoebozoa, whereas families 3 and 5 expanded later within the dictyostelids. The family 6 cAMP receptors that have experimentally supported roles in multicellular development in dictyostelids ( carA-carD; tasA/B) originated at the root of all dictyostelids and only have weakly associated homologs in Physarum polycephalum. Our analysis identified candidate GPCRs which have evolved in the dictyostelids and could have been co-opted for multicellular development. F1000 Research Limited 2023-02-15 /pmc/articles/PMC10445921/ /pubmed/37645274 http://dx.doi.org/10.12688/openreseurope.15250.2 Text en Copyright: © 2023 Hall G et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Hall, Grant
Kelly, Sarah
Schaap, Pauline
Schilde, Christina
Phylogeny-wide analysis of G-protein coupled receptors in social amoebas and implications for the evolution of multicellularity
title Phylogeny-wide analysis of G-protein coupled receptors in social amoebas and implications for the evolution of multicellularity
title_full Phylogeny-wide analysis of G-protein coupled receptors in social amoebas and implications for the evolution of multicellularity
title_fullStr Phylogeny-wide analysis of G-protein coupled receptors in social amoebas and implications for the evolution of multicellularity
title_full_unstemmed Phylogeny-wide analysis of G-protein coupled receptors in social amoebas and implications for the evolution of multicellularity
title_short Phylogeny-wide analysis of G-protein coupled receptors in social amoebas and implications for the evolution of multicellularity
title_sort phylogeny-wide analysis of g-protein coupled receptors in social amoebas and implications for the evolution of multicellularity
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10445921/
https://www.ncbi.nlm.nih.gov/pubmed/37645274
http://dx.doi.org/10.12688/openreseurope.15250.2
work_keys_str_mv AT hallgrant phylogenywideanalysisofgproteincoupledreceptorsinsocialamoebasandimplicationsfortheevolutionofmulticellularity
AT kellysarah phylogenywideanalysisofgproteincoupledreceptorsinsocialamoebasandimplicationsfortheevolutionofmulticellularity
AT schaappauline phylogenywideanalysisofgproteincoupledreceptorsinsocialamoebasandimplicationsfortheevolutionofmulticellularity
AT schildechristina phylogenywideanalysisofgproteincoupledreceptorsinsocialamoebasandimplicationsfortheevolutionofmulticellularity