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Evaluation of a Quantitative Dual-Target EBV DNA Test on a Fully Automated Molecular Testing System
The measurement of Epstein–Barr virus (EBV) deoxyribonucleic acid (DNA) is key to diagnosing and managing EBV-associated complications in transplant recipients. The performance of the new Conformité Européenne (CE) and Food and Drug Administration (FDA)-cleared quantitative Roche cobas EBV real-time...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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American Society for Microbiology
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10446858/ https://www.ncbi.nlm.nih.gov/pubmed/37432105 http://dx.doi.org/10.1128/jcm.00518-23 |
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author | Lütgehetmann, Marc Albert, Eliseo Hamilton, Aaron Jarem, Daniel Pfefferle, Susanne Stucki, Heinz Navarro, David |
author_facet | Lütgehetmann, Marc Albert, Eliseo Hamilton, Aaron Jarem, Daniel Pfefferle, Susanne Stucki, Heinz Navarro, David |
author_sort | Lütgehetmann, Marc |
collection | PubMed |
description | The measurement of Epstein–Barr virus (EBV) deoxyribonucleic acid (DNA) is key to diagnosing and managing EBV-associated complications in transplant recipients. The performance of the new Conformité Européenne (CE) and Food and Drug Administration (FDA)-cleared quantitative Roche cobas EBV real-time PCR assay was determined by using EDTA-plasma dilution panels and clinical samples that were spiked with either the World Health Organization’s EBV international standard or high-titer EBV lambda stock. Correlation with the Abbott Realtime EBV assay was assessed in clinical specimens and conducted at two independent laboratories. An in silico analysis revealed that the dual-target test (EBNA1 and BMRF2) was 100% inclusive for the known diversity of EBV. The overall limit of detection (LoD) was 16.6 IU/mL for genotype 1 (GT1). GT2 LoD was verified at 18.8 IU/mL. The linear ranges were from 1.40 × 10(1) to 2.30 × 10(8) IU/mL and from 2.97 × 10(1) to 9.90 × 10(7) IU/mL for GT1 and GT2, respectively. Accuracy was confirmed across the linear range (mean difference not exceeding ±0.18 log(10)). Precision was not influenced by the factors analyzed (standard deviation of 0.02 to 0.17 log(10)), including the presence of potentially interfering endogenous or exogenous substances. Plasma samples were stable under several conditions (variable time points, storage, and freeze/thaw cycles). In clinical EBV DNA-positive samples, correlation between the cobas EBV test and the comparator was high (n = 126 valid results; R(2) = 0.96) with a 0.1 mean log(10) titer difference. The cobas EBV test is an accurate, sensitive, specific, and reproducible assay for the detection of EBV DNAemia in plasma. In general, high levels of automation and calibration to the international standard will lead to improvements in the harmonization of quantitative EBV DNA test results across laboratories. |
format | Online Article Text |
id | pubmed-10446858 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | American Society for Microbiology |
record_format | MEDLINE/PubMed |
spelling | pubmed-104468582023-08-24 Evaluation of a Quantitative Dual-Target EBV DNA Test on a Fully Automated Molecular Testing System Lütgehetmann, Marc Albert, Eliseo Hamilton, Aaron Jarem, Daniel Pfefferle, Susanne Stucki, Heinz Navarro, David J Clin Microbiol Virology The measurement of Epstein–Barr virus (EBV) deoxyribonucleic acid (DNA) is key to diagnosing and managing EBV-associated complications in transplant recipients. The performance of the new Conformité Européenne (CE) and Food and Drug Administration (FDA)-cleared quantitative Roche cobas EBV real-time PCR assay was determined by using EDTA-plasma dilution panels and clinical samples that were spiked with either the World Health Organization’s EBV international standard or high-titer EBV lambda stock. Correlation with the Abbott Realtime EBV assay was assessed in clinical specimens and conducted at two independent laboratories. An in silico analysis revealed that the dual-target test (EBNA1 and BMRF2) was 100% inclusive for the known diversity of EBV. The overall limit of detection (LoD) was 16.6 IU/mL for genotype 1 (GT1). GT2 LoD was verified at 18.8 IU/mL. The linear ranges were from 1.40 × 10(1) to 2.30 × 10(8) IU/mL and from 2.97 × 10(1) to 9.90 × 10(7) IU/mL for GT1 and GT2, respectively. Accuracy was confirmed across the linear range (mean difference not exceeding ±0.18 log(10)). Precision was not influenced by the factors analyzed (standard deviation of 0.02 to 0.17 log(10)), including the presence of potentially interfering endogenous or exogenous substances. Plasma samples were stable under several conditions (variable time points, storage, and freeze/thaw cycles). In clinical EBV DNA-positive samples, correlation between the cobas EBV test and the comparator was high (n = 126 valid results; R(2) = 0.96) with a 0.1 mean log(10) titer difference. The cobas EBV test is an accurate, sensitive, specific, and reproducible assay for the detection of EBV DNAemia in plasma. In general, high levels of automation and calibration to the international standard will lead to improvements in the harmonization of quantitative EBV DNA test results across laboratories. American Society for Microbiology 2023-07-11 /pmc/articles/PMC10446858/ /pubmed/37432105 http://dx.doi.org/10.1128/jcm.00518-23 Text en Copyright © 2023 Lütgehetmann et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Virology Lütgehetmann, Marc Albert, Eliseo Hamilton, Aaron Jarem, Daniel Pfefferle, Susanne Stucki, Heinz Navarro, David Evaluation of a Quantitative Dual-Target EBV DNA Test on a Fully Automated Molecular Testing System |
title | Evaluation of a Quantitative Dual-Target EBV DNA Test on a Fully Automated Molecular Testing System |
title_full | Evaluation of a Quantitative Dual-Target EBV DNA Test on a Fully Automated Molecular Testing System |
title_fullStr | Evaluation of a Quantitative Dual-Target EBV DNA Test on a Fully Automated Molecular Testing System |
title_full_unstemmed | Evaluation of a Quantitative Dual-Target EBV DNA Test on a Fully Automated Molecular Testing System |
title_short | Evaluation of a Quantitative Dual-Target EBV DNA Test on a Fully Automated Molecular Testing System |
title_sort | evaluation of a quantitative dual-target ebv dna test on a fully automated molecular testing system |
topic | Virology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10446858/ https://www.ncbi.nlm.nih.gov/pubmed/37432105 http://dx.doi.org/10.1128/jcm.00518-23 |
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