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Quantifying the spatial clustering characteristics of radiographic emphysema explains variability in pulmonary function
Quantitative assessment of emphysema in CT scans has mostly focused on calculating the percentage of lung tissue that is deemed abnormal based on a density thresholding strategy. However, this overall measure of disease burden discards virtually all the spatial information encoded in the scan that i...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10449810/ https://www.ncbi.nlm.nih.gov/pubmed/37620507 http://dx.doi.org/10.1038/s41598-023-40950-8 |
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author | Vestal, Brian E. Ghosh, Debashis Estépar, Raúl San José Kechris, Katerina Fingerlin, Tasha Carlson, Nichole E. |
author_facet | Vestal, Brian E. Ghosh, Debashis Estépar, Raúl San José Kechris, Katerina Fingerlin, Tasha Carlson, Nichole E. |
author_sort | Vestal, Brian E. |
collection | PubMed |
description | Quantitative assessment of emphysema in CT scans has mostly focused on calculating the percentage of lung tissue that is deemed abnormal based on a density thresholding strategy. However, this overall measure of disease burden discards virtually all the spatial information encoded in the scan that is implicitly utilized in a visual assessment. This simplification is likely grouping heterogenous disease patterns and is potentially obscuring clinical phenotypes and variable disease outcomes. To overcome this, several methods that attempt to quantify heterogeneity in emphysema distribution have been proposed. Here, we compare three of those: one based on estimating a power law for the size distribution of contiguous emphysema clusters, a second that looks at the number of emphysema-to-emphysema voxel adjacencies, and a third that applies a parametric spatial point process model to the emphysema voxel locations. This was done using data from 587 individuals from Phase 1 of COPDGene that had an inspiratory CT scan and plasma protein abundance measurements. The associations between these imaging metrics and visual assessment with clinical measures (FEV[Formula: see text] , FEV[Formula: see text] -FVC ratio, etc.) and plasma protein biomarker levels were evaluated using a variety of regression models. Our results showed that a selection of spatial measures had the ability to discern heterogeneous patterns among CTs that had similar emphysema burdens. The most informative quantitative measure, average cluster size from the point process model, showed much stronger associations with nearly every clinical outcome examined than existing CT-derived emphysema metrics and visual assessment. Moreover, approximately 75% more plasma biomarkers were found to be associated with an emphysema heterogeneity phenotype when accounting for spatial clustering measures than when they were excluded. |
format | Online Article Text |
id | pubmed-10449810 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-104498102023-08-26 Quantifying the spatial clustering characteristics of radiographic emphysema explains variability in pulmonary function Vestal, Brian E. Ghosh, Debashis Estépar, Raúl San José Kechris, Katerina Fingerlin, Tasha Carlson, Nichole E. Sci Rep Article Quantitative assessment of emphysema in CT scans has mostly focused on calculating the percentage of lung tissue that is deemed abnormal based on a density thresholding strategy. However, this overall measure of disease burden discards virtually all the spatial information encoded in the scan that is implicitly utilized in a visual assessment. This simplification is likely grouping heterogenous disease patterns and is potentially obscuring clinical phenotypes and variable disease outcomes. To overcome this, several methods that attempt to quantify heterogeneity in emphysema distribution have been proposed. Here, we compare three of those: one based on estimating a power law for the size distribution of contiguous emphysema clusters, a second that looks at the number of emphysema-to-emphysema voxel adjacencies, and a third that applies a parametric spatial point process model to the emphysema voxel locations. This was done using data from 587 individuals from Phase 1 of COPDGene that had an inspiratory CT scan and plasma protein abundance measurements. The associations between these imaging metrics and visual assessment with clinical measures (FEV[Formula: see text] , FEV[Formula: see text] -FVC ratio, etc.) and plasma protein biomarker levels were evaluated using a variety of regression models. Our results showed that a selection of spatial measures had the ability to discern heterogeneous patterns among CTs that had similar emphysema burdens. The most informative quantitative measure, average cluster size from the point process model, showed much stronger associations with nearly every clinical outcome examined than existing CT-derived emphysema metrics and visual assessment. Moreover, approximately 75% more plasma biomarkers were found to be associated with an emphysema heterogeneity phenotype when accounting for spatial clustering measures than when they were excluded. Nature Publishing Group UK 2023-08-24 /pmc/articles/PMC10449810/ /pubmed/37620507 http://dx.doi.org/10.1038/s41598-023-40950-8 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Vestal, Brian E. Ghosh, Debashis Estépar, Raúl San José Kechris, Katerina Fingerlin, Tasha Carlson, Nichole E. Quantifying the spatial clustering characteristics of radiographic emphysema explains variability in pulmonary function |
title | Quantifying the spatial clustering characteristics of radiographic emphysema explains variability in pulmonary function |
title_full | Quantifying the spatial clustering characteristics of radiographic emphysema explains variability in pulmonary function |
title_fullStr | Quantifying the spatial clustering characteristics of radiographic emphysema explains variability in pulmonary function |
title_full_unstemmed | Quantifying the spatial clustering characteristics of radiographic emphysema explains variability in pulmonary function |
title_short | Quantifying the spatial clustering characteristics of radiographic emphysema explains variability in pulmonary function |
title_sort | quantifying the spatial clustering characteristics of radiographic emphysema explains variability in pulmonary function |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10449810/ https://www.ncbi.nlm.nih.gov/pubmed/37620507 http://dx.doi.org/10.1038/s41598-023-40950-8 |
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